Cold Acclimation in oats and other plants: Dissecting low temperature responses using a comparative genomic approach.

No abstract is available for this paper.

• Publication year

  2009

• Venue

  Unknown venue

• Publication date

  2009-02-27

• Fields of study

  Biology, Environmental Science

• Identifiers

  No identifiers available.

• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar

• No claims are published for this paper.

• No concepts are published for this paper.

• Identification of ICE2, a gene involved in cold acclimation which determines freezing tolerance in Arabidopsis thaliana.

  2009cited by this paper
• CDD: specific functional annotation with the Conserved Domain Database

  2008cited by this paper
• Multilevel genomic analysis of the response of transcripts, enzyme activities and metabolites in Arabidopsis rosettes to a progressive decrease of temperature in the non-freezing range.

  2008cited by this paper
• Agronomic performance and quality of oat (Avena sativa L.) genotypes of worldwide origin produced under Central European growing conditions

  2007cited by this paper
• The Pfam protein families database

  2007cited by this paper
• New developments in the InterPro database

  2007cited by this paper
• Genome Plasticity a Key Factor in the Success of Polyploid Wheat Under Domestication

  2007cited by this paper
• The molecular basis of vernalization-induced flowering in cereals.

  2007cited by this paper
• Cold stress regulation of gene expression in plants.

  2007cited by this paper
• Characterization of Stress-Responsive CIPK Genes in Rice for Stress Tolerance Improvement1[W]

  2007cited by this paper
• Advances in Cytokinin Signaling

  2007cited by this paper
• Desaturase mutants reveal that membrane rigidification acts as a cold perception mechanism upstream of the diacylglycerol kinase pathway in Arabidopsis cells

  2006cited by this paper
• Mapping of barley homologs to genes that regulate low temperature tolerance in Arabidopsis

  2006cited by this paper
• The wheat and barley vernalization gene VRN3 is an orthologue of FT

  2006influential reference
• Differential responses of antioxidative system to chilling and drought in four rice cultivars differing in sensitivity.

  2006cited by this paper
• Functional analysis of rice DREB1/CBF-type transcription factors involved in cold-responsive gene expression in transgenic rice.

  2006cited by this paper
• Transcriptomic Footprints Disclose Specificity of Reactive Oxygen Species Signaling in Arabidopsis1[W]

  2006cited by this paper
• A R2R3 Type MYB Transcription Factor Is Involved in the Cold Regulation of CBF Genes and in Acquired Freezing Tolerance*

  2006cited by this paper
• CLU: A new algorithm for EST clustering

  2005cited by this paper
• Structural, Functional, and Phylogenetic Characterization of a Large CBF Gene Family in Barley

  2005cited by this paper
• PatMatch: a program for finding patterns in peptide and nucleotide sequences

  2005cited by this paper
• Effect of intermediates on ascorbic acid and oxalate biosynthesis of rice and in relation to its stress resistance.

  2005cited by this paper
• Low Temperature Induction of Arabidopsis CBF1, 2, and 3 Is Gated by the Circadian Clock1

  2005influential reference
• The MKK2 pathway mediates cold and salt stress signaling in Arabidopsis.

  2004cited by this paper
• Chilling, oxidative stress and antioxidant responses inArabidopsis thaliana callus

  2004cited by this paper
• CBF2/DREB1C is a negative regulator of CBF1/DREB1B and CBF3/DREB1A expression and plays a central role in stress tolerance in Arabidopsis.

  2004cited by this paper
• Freezing-sensitive tomato has a functional CBF cold response pathway, but a CBF regulon that differs from that of freezing-tolerant Arabidopsis.

  2004cited by this paper
• Reactive oxygen gene network of plants.

  2004cited by this paper
• Identification of cold-inducible downstream genes of the Arabidopsis DREB1A/CBF3 transcriptional factor using two microarray systems.

  2004cited by this paper
• The Wheat VRN2 Gene Is a Flowering Repressor Down-Regulated by Vernalization

  2004influential reference
• Type-A Arabidopsis Response Regulators Are Partially Redundant Negative Regulators of Cytokinin Signaling Online version contains Web-only data.

  2004cited by this paper
• Reactive oxygen species: metabolism, oxidative stress, and signal transduction.

  2004cited by this paper
• Expression of an active tobacco mitogen-activated protein kinase kinase kinase enhances freezing tolerance in transgenic maize.

  2004cited by this paper
• Characterization of the expression of a desiccation-responsive rd29 gene of Arabidopsis thaliana and analysis of its promoter in transgenic plants

  2004cited by this paper
• A single amino acid substitution in the Arabidopsis FIERY1/HOS2 protein confers cold signaling specificity and lithium tolerance.

  2004cited by this paper
• Roles of the CBF2 and ZAT12 transcription factors in configuring the low temperature transcriptome of Arabidopsis.

  2004influential reference
• OsDREB genes in rice, Oryza sativa L., encode transcription activators that function in drought-, high-salt- and cold-responsive gene expression.

  2003cited by this paper
• Journal of Experimental Botany, Page 1 of 10 DOI: 10.1093/jxb/erg247

  2003cited by this paper
• The effect of short‐term low‐temperature treatments on gene expression in Arabidopsis correlates with changes in intracellular Ca2+ levels

  2003cited by this paper
• Monitoring Expression Profiles of Rice Genes under Cold, Drought, and High-Salinity Stresses and Abscisic Acid Application Using cDNA Microarray and RNA Gel-Blot Analyses1[w]

  2003cited by this paper
• CIPK3, a Calcium Sensor–Associated Protein Kinase That Regulates Abscisic Acid and Cold Signal Transduction in Arabidopsis Article, publication date, and citation information can be found at www.plantcell.org/cgi/doi/10.1105/tpc.006858.

  2003cited by this paper
• Positional cloning of the wheat vernalization gene VRN1

  2003influential reference
• ICE1: a regulator of cold-induced transcriptome and freezing tolerance in Arabidopsis.

  2003cited by this paper
• Arabidopsis Transcriptome Profiling Indicates That Multiple Regulatory Pathways Are Activated during Cold Acclimation in Addition to the CBF Cold Response Pathway Online version contains Web-only data. Article, publication date, and citation information can be found at www.plantcell.org/cgi/doi/10.1

  2002influential reference
• Identification of a novel low-temperature-response element in the promoter of the barley (Hordeum vulgare L) gene blt101.1

  2001cited by this paper
• Plant Freezing and Damage

  2001cited by this paper
• Components of the Arabidopsis C-repeat/dehydration-responsive element binding factor cold-response pathway are conserved in Brassica napus and other plant species.

  2001cited by this paper
• FIERY1 encoding an inositol polyphosphate 1-phosphatase is a negative regulator of abscisic acid and stress signaling in Arabidopsis.

  2001cited by this paper
• Cold-activation of Brassica napus BN115 promoter is mediated by structural changes in membranes and cytoskeleton, and requires Ca2+ influx.

  2001cited by this paper
• Identifying regulatory networks by combinatorial analysis of promoter elements

  2001cited by this paper
• Molecular responses to dehydration and low temperature: differences and cross-talk between two stress signaling pathways.

  2000influential reference
• Overexpression of the Arabidopsis CBF3 transcriptional activator mimics multiple biochemical changes associated with cold acclimation.

  2000cited by this paper
• Functional analysis of oxidative stress-activated mitogen-activated protein kinase cascade in plants.

  2000cited by this paper
• Early steps in cold sensing by plant cells: the role of actin cytoskeleton and membrane fluidity.

  2000cited by this paper
• Chitinase genes responsive to cold encode antifreeze proteins in winter cereals.

  2000cited by this paper
• Cold comfort farm: the acclimation of plants to freezing temperatures.

  2000cited by this paper
• Imaging spatial and cellular characteristics of low temperature calcium signature after cold acclimation in Arabidopsis.

  2000cited by this paper
• Temperature Sensing by Plants: Calcium-Permeable Channels as Primary Sensors—A Model

  1999cited by this paper
• PLANT COLD ACCLIMATION: Freezing Tolerance Genes and Regulatory Mechanisms.

  1999influential reference
• Cytochemical localization of calcium and Ca2+-ATPase activity in plant cells under chilling stress: A comparative study between the chilling-sensitive maize and the chilling-insensitive winter wheat

  1999cited by this paper
• Two Transcription Factors, DREB1 and DREB2, with an EREBP/AP2 DNA Binding Domain Separate Two Cellular Signal Transduction Pathways in Drought- and Low-Temperature-Responsive Gene Expression, Respectively, in Arabidopsis

  1998cited by this paper
• Suppression of auxin signal transduction by a MAPK cascade in higher plants

  1998cited by this paper
• Low temperature-stimulated phosphorylation regulates the binding of nuclear factors to the promoter of Wcs120, a cold-specific gene in wheat

  1998cited by this paper
• Plant Evolution under Domestication

  1998cited by this paper
• An Arabidopsis gene family encoding DRE/CRT binding proteins involved in low-temperature-responsive gene expression.

  1998cited by this paper
• Mode of action of the COR15a gene on the freezing tolerance of Arabidopsis thaliana.

  1998cited by this paper
• Low temperature regulation of the Arabidopsis CBF family of AP2 transcriptional activators as an early step in cold-induced COR gene expression.

  1998cited by this paper
• Inheritance of Tolerance to Chilling Stress in Rice during Germination and Plumule Greening

  1998cited by this paper
• Arabidopsis thaliana CBF1 encodes an AP2 domain-containing transcriptional activator that binds to the C-repeat/DRE, a cis-acting DNA regulatory element that stimulates transcription in response to low temperature and water deficit.

  1997cited by this paper
• Effect of Cold Acclimation on the Lipid Composition of the Inner and Outer Membrane of the Chloroplast Envelope Isolated from Rye Leaves

  1997cited by this paper
• Membrane Fluidity and Temperature Perception

  1997cited by this paper
• Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.

  1997cited by this paper
• Seeds handbook: biology, production, processing, and storage.

  1997cited by this paper
• The induction of kin genes in cold-acclimating Arabidopsis thaliana. Evidence of a role for calcium

  1997cited by this paper
• Requirement of a CCGAC cis-acting element for cold induction of the BN115 gene from winter Brassica napus

  1996cited by this paper
• Stress signaling in plants: a mitogen-activated protein kinase pathway is activated by cold and drought.

  1996cited by this paper
• Cold calcium signaling in Arabidopsis involves two cellular pools and a change in calcium signature after acclimation.

  1996influential reference
• A gene encoding a mitogen-activated protein kinase kinase kinase is induced simultaneously with genes for a mitogen-activated protein kinase and an S6 ribosomal protein kinase by touch, cold, and water stress in Arabidopsis thaliana.

  1996cited by this paper
• Quantitative Monitoring of Gene Expression Patterns with a Complementary DNA Microarray

  1995cited by this paper
• Cold Acclimation of Arabidopsis thaliana (Effect on Plasma Membrane Lipid Composition and Freeze-Induced Lesions)

  1995cited by this paper
• Low-temperature signal transduction: induction of cold acclimation-specific genes of alfalfa by calcium at 25 degrees C.

  1995cited by this paper
• Release of Ca2+ from individual plant vacuoles by both InsP3 and cyclic ADP-ribose

  1995cited by this paper
• Genes Galore: A Summary of Methods for Accessing Results from Large-Scale Partial Sequencing of Anonymous Arabidopsis cDNA Clones

  1994cited by this paper
• A Comparison of Freezing Injury in Oat and Rye: Two Cereals at the Extremes of Freezing Tolerance

  1994cited by this paper
• Differential Gene Expression in Chilling-Acclimated Maize Seedlings and Evidence for the Involvement of Abscisic Acid in Chilling Tolerance

  1994cited by this paper
• The 5′-region of Arabidopsis thaliana cor15a has cis-acting elements that confer cold-, drought- and ABA-regulated gene expression

  1994cited by this paper
• A novel cis-acting element in an Arabidopsis gene is involved in responsiveness to drought, low-temperature, or high-salt stress.

  1994cited by this paper
• The primary signal in the biological perception of temperature: Pd-catalyzed hydrogenation of membrane lipids stimulated the expression of the desA gene in Synechocystis PCC6803.

  1993cited by this paper
• Multiplexed biochemical assays with biological chips

  1993cited by this paper
• Chilling injury in germinating seeds: basic mechanisms and agricultural implications

  1993cited by this paper
• Cold-Induced Changes in Freezing Tolerance, Protein Phosphorylation, and Gene Expression (Evidence for a Role of Calcium)

  1993influential reference
• Cold acclimation and cold-regulated gene expression in ABA mutants of Arabidopsis thaliana

  1991cited by this paper
• Transgenic plant aequorin reports the effects of touch and cold-shock and elicitors on cytoplasmic calcium

  1991cited by this paper
• Stabilization of lipid bilayer vesicles by sucrose during freezing.

  1986cited by this paper
• Altered gene expression during cold acclimation of spinach.

  1985cited by this paper
• Overlapping genes and information theory.

  1981cited by this paper
• Selection for Winterhardiness in Wheat. I. Identification of Genotypic Variability1

  1979cited by this paper
• Nuclear dna amounts in angiosperms.

  1976cited by this paper
• Bmc Plant Biology Generation and Analysis of 9792 Est Sequences from Cold Acclimated Oat, Avena Sativa

  year unknowncited by this paper

• Regulatory network of gene expression during the development of frost tolerance in plants

  2013cites this paper