TOGA: an automated parsing technology for analyzing expression of nearly all genes.

No abstract is available for this paper.

• Publication year

  2000

• Venue

  Proceedings of the National Academy of Sciences of the United States of America

• Publication date

  2000-02-29

• Fields of study

  Biology, Medicine, Computer Science

• Identifiers
  DOI 10.1073/PNAS.040537997PMID 10681428PMCID PMC15739
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Gene expression analysis by transcript profiling coupled to a gene database query

  1999cited by this paper
• Analysis of differential gene expression by display of 3' end restriction fragments of cDNAs.

  1996cited by this paper
• Expression monitoring by hybridization to high-density oligonucleotide arrays

  1996cited by this paper
• Quantitative Monitoring of Gene Expression Patterns with a Complementary DNA Microarray

  1995cited by this paper
• Differential display of eukaryotic messenger RNA by means of the polymerase chain reaction.

  1992cited by this paper
• Arbitrarily primed PCR fingerprinting of RNA.

  1992cited by this paper
• A simple and very efficient method for generating cDNA libraries.

  1983cited by this paper
• Molecular cloning of gene sequences regulated by platelet-derived growth factor.

  1983cited by this paper
• Tissue-specific expression of mouse alpha-amylase genes.

  1980cited by this paper
• Tissue-specific expression of mouse α-amylase genes

  1980cited by this paper
• On the use of windows for harmonic analysis with the discrete Fourier transform

  1978cited by this paper

• HOTAIR Competitively Binds MiRNA330 as a Molecular Sponge to Increase the Resistance of Gastric Cancer to Trastuzumab.

  2020cites this paper
• Semantic approaches for the meta-optimization of complex biomolecular networks (Approches sémantiques pour la méta-optimisation des réseaux biomoléculaires complexes)

  2018cites this paper
• “Omics”: A Gateway Towards Abiotic Stress Tolerance

  2018cites this paper
• Novel Technologies for Plant Functional Genomics

  2017cites this paper
• Applying genotoxicology tools to identify environmental stressors in support of river management.

  2016cites this paper
• Suppression Subtractive Hybridization Versus Next-Generation Sequencing in Plant Genetic Engineering: Challenges and Perspectives

  2015cites this paper
• Transcriptomic approaches to toxicity assessment

  2013cites this paper
• Review of current and "omics" methods for assessing the toxicity (genotoxicity, teratogenicity and nephrotoxicity) of herbal medicines and mushrooms.

  2012cites this paper
• Candidate Screening through Gene Expression Profile

  2012cites this paper
• Physiological responses of Burkholderia phytofirmans strain PsJN colonized plantlets of grapevine (Vitis vinifera L. ) to low non-freezing temperatures

  2010cites this paper
• The Pharmacogenomics of Personalized Medicine

  2010cites this paper
• Verwendung von Wirkstoffen, erhältlich aus Pflanzen, zur Verhinderung und/oder Verminderung der Auswirkungen von psychoemotionalem Stress auf das Haar

  2009cites this paper
• Methods for quantitation of gene expression.

  2009cites this paper
• Nicht-invasives Screeningverfahren für Wirkstoffe gegen Hautalterung

  2009cites this paper
• From QTL to candidate gene: a genetic approach to alcoholism research.

  2009influential citation
• The transcripted response of barley (Hordeum vulgare L.) to boron toxicity.

  2008cites this paper
• FGD2, a CDC42-specific Exchange Factor Expressed by Antigen-presenting Cells, Localizes to Early Endosomes and Active Membrane Ruffles*

  2008cites this paper
• What is in the brain soup?

  2008cites this paper
• Phytostimulatory effect of Rhizobium and Plant Growth Promoting Rhizobacteria in common bean (Phaseolus vulgaris L.) interaction

  2008cites this paper
• Cellular Assays and Their Application in Drug Discovery

  2008cites this paper
• Phytostimulatory effect of Rhizobium and Plant Growth Promoting Rhizobacteria in common bean (Phaseolus vulgaris L.) interaction

  2008cites this paper
• Scaling of gene expression data allowing the comparison of different gene expression platforms.

  2008cites this paper
• Rcl is a novel ETV1/ER81 target gene upregulated in breast tumors

  2008cites this paper
• iGentifier: indexing and large-scale profiling of unknown transcriptomes

  2007cites this paper
• Integrating Synapse Proteomics with Transcriptional Regulation

  2007cites this paper
• Introduction to Omics Platforms

  2007cites this paper
• Alpha‐synuclein in the nucleus accumbens induces changes in cocaine behaviour in rats

  2007cites this paper
• Identification of Genes Involved in Positive Selection of CD4+8+ Thymocytes: Expanding the Inventory

  2007cites this paper
• Regulation of alpha‐synuclein expression in alcohol‐preferring and ‐non preferring rats

  2006cites this paper
• OMICS-driven biomarker discovery in nutrition and health.

  2006cites this paper
• Selective deficits in the expression of striatal‐enriched mRNAs in Huntington's disease

  2006cites this paper
• Etude de l'écosystème fromager par une approche biochimique et moléculaire

  2006cites this paper
• Critical Appraisal of DNA Microarrays in Psychiatric

  2006cites this paper
• Critical appraisal of DNA microarrays in psychiatric genomics.

  2006cites this paper
• Serielle Analyse der Genexpression (SAGE): Etablierung, Statistik und Reliabilität Zur Erlangung des akademischen Grades Doctor medicinae (Dr. med.) vorgelegt der Medizinischen Fakultät Charité der Humboldt-Universität zu Berlin Stefanie Castell aus München

  2006cites this paper
• Functional genomic methodologies.

  2006cites this paper
• Necdin and E2F4 are modulated by rosiglitazone therapy in diabetic human adipose and muscle tissue.

  2006cites this paper
• DARFA: a novel technique for studying differential gene expression and bacterial comparative genomics.

  2005cites this paper
• New prospects and strategies for drug target discovery in neurodegenerative disorders

  2005cites this paper
• Aberrant recombination involving the granzyme locus occurs in Atm-/- T-cell lymphomas.

  2005cites this paper
• Regulation of alpha-synuclein expression in limbic and motor brain regions of morphine-treated mice.

  2005cites this paper
• A rare fraction of human hematopoietic stem cells with large telomeres

  2005cites this paper
• Regulation of α-Synuclein Expression in Limbic and Motor Brain Regions of Morphine-Treated Mice

  2005cites this paper
• Expression Profiling and QTL Analysis: a Powerful Complementary Strategy in Drug Abuse Research

  2005cites this paper
• Expression Profiling Methods Used In Drug Abuse Research

  2005cites this paper
• Current Awareness on Comparative and Functional Genomics

  2005cites this paper
• Identification of complement 5a‐like receptor (C5L2) from astrocytes: characterization of anti‐inflammatory properties

  2005cites this paper
• UvA-DARE ( Digital Academic Repository ) Evaluation of the similarity of gene expression data estimated with SAGE and Affymetrix

  2005cites this paper
• Evaluation of the similarity of gene expression data estimated with SAGE and Affymetrix GeneChips

  2005cites this paper
• Genome Mapping and Genomic Strategies for Crop Improvement

  2004cites this paper
• Global Gene Expression Analysis by Combinatorial Optimization

  2004cites this paper
• Caractérisation de l'expression génique des tumeurs des voies aérodigestives supérieures : perspectives diagnostiques et thérapeutiques

  2004cites this paper
• Restriction-mediated Differential Display (RMDD) Identifies pip92 as a Pro-Apoptotic Gene Product Induced during Focal Cerebral Ischemia

  2004cites this paper
• Gene expression in the pathophysiology of type 2 diabetes mellitus

  2004cites this paper
• Gene expression in humans with diabetes and prediabetes: what have we learned about diabetes pathophysiology?

  2004cites this paper
• Comprehensive gene expression analysis by transcript profiling

  2004cites this paper
• Expression profiling using a hexamer-based universal microarray

  2004cites this paper
• Brain gene expression: genomics and genetics.

  2004cites this paper
• Whole-genome expression profiling through fragment display and combinatorial gene identification.

  2004cites this paper
• Cell culture modeling of specialized tissue: identification of genes expressed specifically by follicle-associated epithelium of Peyer's patch by expression profiling of Caco-2/Raji co-cultures.

  2004cites this paper
• DNA microarray analysis of postmortem brain tissue.

  2004cites this paper
• Cloning of a specific ripening-related gene from the multiple of ripening-related genes identified from a single band excised from a cDNA-AFLP gel

  2004cites this paper
• Exploiting immune surveillance mechanisms in mucosal vaccine development

  2004cites this paper
• Large-scale screening for genes involved in T-cell signaling: do we know all the players now?

  2004cites this paper
• Analysis of Microglial Gene Expression

  2004cites this paper
• Glutathione S-transferase 8-8 expression is lower in alcohol-preferring than in alcohol-nonpreferring rats.

  2004influential citation
• High-throughput analysis of mRNA expression: microarrays are not the whole story

  2004cites this paper
• Gene expression profiling of plant responses to abiotic stress

  2003cites this paper
• Microarray technology: a review of new strategies to discover candidate vulnerability genes in psychiatric disorders.

  2003cites this paper
• From pharmacotherapy to pathophysiology: emerging mechanisms of apolipoprotein D in psychiatric disorders.

  2003cites this paper
• Searching for Interferon-Induced Genes That Inhibit Hepatitis B Virus Replication in Transgenic Mouse Hepatocytes

  2003cites this paper
• Profile of gene expression induced by the tumour promotor TPA in murine epithelial cells

  2003cites this paper
• α-Synuclein maps to a quantitative trait locus for alcohol preference and is differentially expressed in alcohol-preferring and -nonpreferring rats

  2003cites this paper
• Gene expression changes in BVDV2-infected MDBK cells.

  2003cites this paper
• Y box-binding protein 1 induces resistance to oncogenic transformation by the phosphatidylinositol 3-kinase pathway

  2003cites this paper
• Antipsychotic drug treatment alters expression of mRNAs encoding lipid metabolism-related proteins

  2003cites this paper
• Gene Discovery Using a Human Vestibular Schwannoma cDNA Library Constructed from a Patient with Neurofibromatosis Type 2 (NF2)

  2003cites this paper
• Quantitative cDNA-AFLP analysis for genome-wide expression studies

  2003cites this paper
• Peptidoglycan recognition protein expression in mouse Peyer's Patch follicle associated epithelium suggests functional specialization.

  2003cites this paper
• Assessing gene expression variation in normal human tissues using GeneTag, a novel, global, sensitive profiling method.

  2003cites this paper
• Functional genomics of neural and behavioral plasticity.

  2003cites this paper
• Gene expression changes in MDBK cells infected with genotype 2 bovine viral diarrhoea virus.

  2003cites this paper
• Heterogeneous expression of the triggering receptor expressed on myeloid cells‐2 on adult murine microglia

  2002influential citation
• Differential display analysis of breast carcinoma cells enriched by immunomagnetic target cell selection: Gene expression profiles in bone marrow target cells

  2002cites this paper
• Targeting approaches to oral drug delivery

  2002cites this paper
• Gene Expression Profiling with DNA Microarrays: Advancing Our Understanding of Psychiatric Disorders

  2002cites this paper
• Pincher, a pinocytic chaperone for nerve growth factor/TrkA signaling endosomes

  2002influential citation
• Expression Profiling to Understand Actions of NMDA/Glutamate Receptor Antagonists in Rat Brain

  2002cites this paper
• Functional genomics in neuropsychiatric disorders and in neuropharmacology

  2002influential citation
• Toxicogenomics, Drug Discovery, and the Pathologist

  2002cites this paper
• Functional genomics approaches to understanding brain disorders.

  2002cites this paper
• MOLECULAR TECHNIQUES FOR STUDYING GENE EXPRESSION IN CARCINOGENESIS

  2002cites this paper
• Synexpression analysis of ESTs in the rat brain reveals distinct patterns and potential drug targets.

  2002cites this paper
• Biology and pathogenesis of lymphocytic choriomeningitis virus infection.

  2002cites this paper
• Open system gene expression profiling and identification of novel genes for targeted vaccine delivery

  2002cites this paper
• The neurobiology of apolipoproteins in psychiatric disorders

  2002influential citation
• Functional Genomics

  2002cites this paper
• A decade of differential display.

  2002cites this paper
• Gene cloning and expression profiling by rapid amplification of gene inserts with universal vector primers.

  2002cites this paper
• Protective and Pathological Immune Responses in the CNS

  2002cites this paper