Gene Expression Analyses and Association Studies of Wood Development Genes in Loblolly Pine (Pinus taeda L.)

No abstract is available for this paper.

• Publication year

  2011

• Venue

  Unknown venue

• Publication date

  2011-10-21

• Fields of study

  Biology, Environmental Science

• Identifiers

  No identifiers available.

• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar

• No claims are published for this paper.

• No concepts are published for this paper.

• Natural variation in expression of genes involved in xylem development in loblolly pine (Pinus taeda L.)

  2011cited by this paper
• Allele mining in crops: prospects and potentials.

  2010cited by this paper
• Gene expression levels as endophenotypes in genome-wide association studies of Alzheimer disease

  2010cited by this paper
• Patterns of Population Structure and Environmental Associations to Aridity Across the Range of Loblolly Pine (Pinus taeda L., Pinaceae)

  2010cited by this paper
• Analysis of synonymous codon usage in Zea mays

  2010cited by this paper
• Rational association of genes with traits using a genome-scale gene network for Arabidopsis thaliana

  2010cited by this paper
• Genome-wide association study of 107 phenotypes in a common set of Arabidopsis thaliana inbred lines

  2010cited by this paper
• Allele-specific expression of a weeping lovegrass gene from the lignin biosynthetic pathway, caffeoyl-coenzyme A 3-O-methyltransferase

  2010cited by this paper
• From gene expression to gene regulatory networks in Arabidopsis thaliana

  2009cited by this paper
• SNP identification in crop plants.

  2009cited by this paper
• Management of gene promoter mutations in molecular diagnostics.

  2009cited by this paper
• Transcriptional regulation of lignin biosynthesis

  2009cited by this paper
• Evaluation of the impact of single nucleotide polymorphisms and primer mismatches on quantitative PCR

  2009cited by this paper
• What Has Natural Variation Taught Us about Plant Development, Physiology, and Adaptation?

  2009cited by this paper
• Functional Characterization of Poplar Wood-Associated NAC Domain Transcription Factors1[C][OA]

  2009cited by this paper
• The role of natural variation in dissecting genetic regulation of primary metabolism

  2009cited by this paper
• A single nucleotide polymorphism in the 3'UTR of the SNCA gene encoding alpha-synuclein is a new potential susceptibility locus for Parkinson disease.

  2009cited by this paper
• Differential Allelic Expression in the Human Genome: A Robust Approach To Identify Genetic and Epigenetic Cis-Acting Mechanisms Regulating Gene Expression

  2008cited by this paper
• High-throughput genotyping and mapping of single nucleotide polymorphisms in loblolly pine (Pinus taeda L.)

  2008cited by this paper
• Status and Prospects of Association Mapping in Plants

  2008cited by this paper
• Silent mutations result in HlyA hypersecretion by reducing intracellular HlyA protein aggregates

  2008cited by this paper
• Dynamics of Arabidopsis Dynamin-Related Protein 1C and a Clathrin Light Chain at the Plasma Membrane[W][OA]

  2008cited by this paper
• Genome-wide association studies for complex traits: consensus, uncertainty and challenges

  2008cited by this paper
• Transcriptional and post-transcriptional enhancement of gene expression by the 5′ UTR intron of rice rubi3 gene in transgenic rice cells

  2008cited by this paper
• Inferring Gene Regulatory Networks From Expression Data by Discovering Fuzzy Dependency Relationships

  2008cited by this paper
• Arabidopsis dynamin-like protein DRP1A: a null mutant with widespread defects in endocytosis, cellulose synthesis, cytokinesis, and cell expansion.

  2008cited by this paper
• A Battery of Transcription Factors Involved in the Regulation of Secondary Cell Wall Biosynthesis in Arabidopsis

  2008cited by this paper
• Expansion and Diversification of the Populus R2R3-MYB Family of Transcription Factors1[W][OA]

  2008cited by this paper
• Involvement of Pinus taeda MYB1 and MYB8 in phenylpropanoid metabolism and secondary cell wall biogenesis: a comparative in planta analysis

  2008cited by this paper
• Wood cell walls: biosynthesis, developmental dynamics and their implications for wood properties.

  2008cited by this paper
• MOR1, the Arabidopsis thaliana homologue of Xenopus MAP215, promotes rapid growth and shrinkage, and suppresses the pausing of microtubules in vivo

  2008cited by this paper
• Cotton benzoquinone reductase: up-regulation during early fiber development and heterologous expression and characterization in Pichia pastoris.

  2008cited by this paper
• Nature of selective constraints on synonymous codon usage of rice differs in GC-poor and GC-rich genes.

  2007cited by this paper
• Microarray gene expression profiling of developmental transitions in Sitka spruce (Picea sitchensis) apical shoots.

  2007cited by this paper
• The factors shaping synonymous codon usage in the genome of Burkholderia mallei.

  2007cited by this paper
• Splicing in disease: disruption of the splicing code and the decoding machinery

  2007cited by this paper
• Expression profiling of the lignin biosynthetic pathway in Norway spruce using EST sequencing and real-time RT-PCR

  2007cited by this paper
• Silent polymorphisms speak: how they affect pharmacogenomics and the treatment of cancer.

  2007cited by this paper
• How to infer gene networks from expression profiles

  2007cited by this paper
• Common genetic variants account for differences in gene expression among ethnic groups

  2007cited by this paper
• Gene-expression variation within and among human populations.

  2007cited by this paper
• Conifer R2R3-MYB transcription factors: sequence analyses and gene expression in wood-forming tissues of white spruce (Picea glauca)

  2007cited by this paper
• Polymorphisms in the 3′ UTR in the neurocalcin δ gene affect mRNA stability, and confer susceptibility to diabetic nephropathy

  2007cited by this paper
• Optimizing lignocellulosic feedstock for improved biofuel productivity and processing

  2007cited by this paper
• Two NAC domain transcription factors, SND1 and NST1, function redundantly in regulation of secondary wall synthesis in fibers of Arabidopsis

  2007cited by this paper
• Relative Impact of Nucleotide and Copy Number Variation on Gene Expression Phenotypes

  2007cited by this paper
• Arabidopsis KAM2/GRV2 Is Required for Proper Endosome Formation and Functions in Vacuolar Sorting and Determination of the Embryo Growth Axis[W][OA]

  2007cited by this paper
• Biosynthesis of cellulose-enriched tension wood in Populus: global analysis of transcripts and metabolites identifies biochemical and developmental regulators in secondary wall biosynthesis.

  2006cited by this paper
• Cellulose synthesis in higher plants.

  2006cited by this paper
• Detection and functional analysis of an SNP in the promoter of the human ferritin H gene that modulates the gene expression.

  2006cited by this paper
• Intronic polymorphisms within TFAP2B regulate transcriptional activity and affect adipocytokine gene expression in differentiated adipocytes.

  2006cited by this paper
• Analysis of promoter regions of co-expressed genes identified by microarray analysis

  2006cited by this paper
• Hearing silence: non-neutral evolution at synonymous sites in mammals

  2006cited by this paper
• DNA Sequence Variation and Selection of Tag Single-Nucleotide Polymorphisms at Candidate Genes for Drought-Stress Response in Pinus taeda L.

  2006cited by this paper
• Identification of a plastid response element that acts as an enhancer within the Chlamydomonas HSP70A promoter

  2006cited by this paper
• Evolving clusters in gene-expression data

  2006cited by this paper
• Genetic association mapping and genome organization of maize.

  2006cited by this paper
• SNPSplicer: systematic analysis of SNP‐dependent splicing in genotyped cDNAs

  2006cited by this paper
• Predicting the effects of amino acid substitutions on protein function.

  2006cited by this paper
• SND1, a NAC Domain Transcription Factor, Is a Key Regulator of Secondary Wall Synthesis in Fibers of Arabidopsis[W]

  2006cited by this paper
• Up-regulation of OsBIHD1, a rice gene encoding BELL homeodomain transcriptional factor, in disease resistance responses.

  2005cited by this paper
• Genomic Regulatory Systems: Development and Evolution

  2005cited by this paper
• Three loblolly pine CesA genes expressed in developing xylem are orthologous to secondary cell wall CesA genes of angiosperms.

  2005cited by this paper
• From phenotypic to molecular polymorphisms involved in naturally occurring variation of plant development.

  2005cited by this paper
• Seasonal variation in gene expression for loblolly pines (Pinus taeda) from different geographical regions.

  2005cited by this paper
• Linkage disequilibrium and association studies in higher plants: Present status and future prospects

  2005cited by this paper
• Compilation of mRNA Polyadenylation Signals in Arabidopsis Revealed a New Signal Element and Potential Secondary Structures1[w]

  2005cited by this paper
• Real-time RT-PCR analysis of loblolly pine (Pinus taeda) arabinogalactan-protein and arabinogalactan-protein-like genes

  2005cited by this paper
• Reverse engineering gene regulatory networks

  2005cited by this paper
• Reverse engineering of regulatory networks in human B cells

  2005cited by this paper
• Identification of genes required for cellulose synthesis by regression analysis of public microarray data sets.

  2005cited by this paper
• Identification of a novel cis-acting element conferring sulfur deficiency response in Arabidopsis roots.

  2005cited by this paper
• Differential Expression of the Arabidopsis Cytochrome c Genes Cytc-1 and Cytc-2. Evidence for the Involvement of TCP-Domain Protein-Binding Elements in Anther- and Meristem-Specific Expression of the Cytc-1 Gene1

  2005cited by this paper
• Genetic Analysis of Variation in Gene Expression in Arabidopsis thaliana

  2005cited by this paper
• Transcriptome profiling of vertical stem segments provides insights into the genetic regulation of secondary growth in hybrid aspen trees.

  2005cited by this paper
• Large deletions within the first intron in VRN-1 are associated with spring growth habit in barley and wheat

  2005cited by this paper
• Detection and preliminary analysis of motifs in promoters of anaerobically induced genes of different plant species.

  2005cited by this paper
• Identification of cis-Elements That Regulate Gene Expression during Initiation of Axillary Bud Outgrowth in Arabidopsis[w]

  2005cited by this paper
• Expansins Abundant in Secondary Xylem Belong to Subgroup A of the α-Expansin Gene Family1[w]

  2004cited by this paper
• Pathogen- and NaCl-Induced Expression of the SCaM-4 Promoter Is Mediated in Part by a GT-1 Box That Interacts with a GT-1-Like Transcription Factor1

  2004cited by this paper
• Identification of genes preferentially expressed during wood formation in Eucalyptus

  2004cited by this paper
• Sequences responsible for the tissue specific promoter activity of a pea legumin gene in tobacco

  2004cited by this paper
• Functional genomics and cell wall biosynthesis in loblolly pine

  2004cited by this paper
• Coordinated Genetic Regulation of Growth and Lignin Revealed by Quantitative Trait Locus Analysis of cDNA Microarray Data in an Interspecific Backcross of Eucalyptus1

  2004cited by this paper
• Inferring Cellular Networks Using Probabilistic Graphical Models

  2004cited by this paper
• Rapid and Transient Activation of Transcription of the ERF3 Gene by Wounding in Tobacco Leaves

  2004cited by this paper
• Sequence and Spacing of TATA Box Elements Are Critical for Accurate Initiation from the β-Phaseolin Promoter*

  2004cited by this paper
• Synergistic effect of upstream sequences, CCAAT box elements, and HSE sequences for enhanced expression of chimaeric heat shock genes in transgenic tobacco

  2004cited by this paper
• Xylem-specific gene expression in loblolly pine

  2004cited by this paper
• A Weed for Wood? Arabidopsis as a Genetic Model for Xylem Development1

  2004cited by this paper
• A High-Resolution Transcript Profile across the Wood-Forming Meristem of Poplar Identifies Potential Regulators of Cambial Stem Cell Identityw⃞

  2004cited by this paper
• Inferring quantitative models of regulatory networks from expression data

  2004cited by this paper
• Advances to Bayesian network inference for generating causal networks from observational biological data

  2004cited by this paper
• The Novel Myb Transcription Factor LCR1 Regulates the CO2-Responsive Gene Cah1, Encoding a Periplasmic Carbonic Anhydrase in Chlamydomonas reinhardtii

  2004cited by this paper
• Nucleotide diversity and linkage disequilibrium in loblolly pine.

  2004cited by this paper
• Molecular basis for the evolution of xylem lignification.

  2004cited by this paper
• Introns are key regulatory elements of rice tubulin expression

  2004cited by this paper
• Involvement of the R2R3-MYB, AtMYB61, in the ectopic lignification and dark-photomorphogenic components of the det3 mutant phenotype.

  2004cited by this paper
• Guar Seed ß-Mannan Synthase Is a Member of the Cellulose Synthase Super Gene Family

  2004cited by this paper
• Association genetics of complex traits in conifers.

  2004cited by this paper

• No citing papers are available for this paper.