Arabidopsis Seed Development and Germination Is Associated with Temporally Distinct Metabolic Switches1[W]

No abstract is available for this paper.

• Publication year

  2006

• Venue

  Plant Physiology

• Publication date

  2006-09-08

• Fields of study

  Biology, Medicine, Environmental Science

• Identifiers
  DOI 10.1104/pp.106.086694PMID 16963520PMCID PMC1630763
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• 9) TM4 Microarray Software Suite

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• Beneficial interactions of mitochondrial metabolism with photosynthetic carbon assimilation.

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• Nitrogen metabolism in higher plants.

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