Rapid and Simple Determination of theEscherichia coli Phylogenetic Group

No abstract is available for this paper.

• Publication year

  2000

• Venue

  Applied and Environmental Microbiology

• Publication date

  2000-10-01

• Fields of study

  Biology, Medicine

• Identifiers
  DOI 10.1128/AEM.66.10.4555-4558.2000PMID 11010916PMCID PMC92342
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Extended virulence genotypes of Escherichia coli strains from patients with urosepsis in relation to phylogeny and host compromise.

  2000influential reference
• Identification of Regions of the Escherichia coliChromosome Specific for Neonatal Meningitis-Associated Strains

  2000cited by this paper
• The Link between Phylogeny and Virulence inEscherichia coli Extraintestinal Infection

  1999cited by this paper
• Accessory DNA in the Genomes of Representatives of the Escherichia coli Reference Collection

  1999cited by this paper
• Chromosomal Regions Specific to Pathogenic Isolates of Escherichia coli Have a Phylogenetically Clustered Distribution

  1998cited by this paper
• Escherichia coli molecular phylogeny using the incongruence length difference test.

  1998cited by this paper
• Rapid pathogen detection using a microchip PCR array instrument.

  1998cited by this paper
• Phylogenetic analysis of Escherichia coli strains causing neonatal meningitis suggests horizontal gene transfer from a predominant pool of highly virulent B2 group strains.

  1998influential reference
• Structure of the Shigella dysenteriae haem transport locus and its phylogenetic distribution in enteric bacteria

  1998cited by this paper
• Haem iron‐transport system in enterohaemorrhagic Escherichia coli O157:H7

  1997cited by this paper
• Detection system for Escherichia coli-specific virulence genes: absence of virulence determinants in B and C strains

  1997cited by this paper
• The complete genome sequence of Escherichia coli K-12.

  1997cited by this paper
• Two pathogenicity islands in uropathogenic Escherichia coli J96: cosmid cloning and sample sequencing

  1996cited by this paper
• Specific and sensitive two-step polymerase chain reaction assay for the detection ofSalmonella species

  1996cited by this paper
• Genotyping may provide rapid identification of Escherichia coli K1 organisms that cause neonatal meningitis.

  1996cited by this paper
• Genetics and regulation of heme iron transport in Shigella dysenteriae and detection of an analogous system in Escherichia coli O157:H7

  1995cited by this paper
• Rapid and accurate identification of Escherichia coli K-12 strains

  1995cited by this paper
• Sex in Escherichia coli does not disrupt the clonal structure of the population: evidence from random amplified polymorphic DNA and restriction-fragment-length polymorphism

  1995cited by this paper
• Use of ribotyping in epidemiological surveillance of nosocomial outbreaks

  1994cited by this paper
• Escherichia coli serotyping and disease in man and animals.

  1992cited by this paper
• Escherichia coli serotyping and disease in man and animals.

  1992cited by this paper
• Phylogenetic distribution of branched RNA-linked multicopy single-stranded DNA among natural isolates of Escherichia coli

  1990influential reference
• Escherichia Coli and Salmonella: Typhimurium Cellular and Molecular Biology

  1987cited by this paper
• Methods of multilocus enzyme electrophoresis for bacterial population genetics and systematics

  1986cited by this paper
• Standard reference strains of Escherichia coli from natural populations

  1984cited by this paper

• International maritime organization, we may have a problem - ballast water treatment triggers global concerns with antimicrobial resistant bacteria.

  2026cites this paper
• Do households or hospitals have a larger contribution to carbapenemase-producing Enterobacteriaceae in municipal wastewater?

  2026cites this paper
• Identification of specific metabolic capacities associated with major extraintestinal pathogenic Escherichia coli lineages

  2026cites this paper
• Antimicrobial resistance profile and molecular analysis of virulence among Escherichia coli isolated from pregnant women with asymptomatic bacteriuria in Gorgan, Iran.

  2026cites this paper
• Ring-tailed coatis (Nasua nasua) are major carriers of ESBL-producing and diarrheagenic E. coli in an Ecological Park in São Paulo, Brazil.

  2026cites this paper
• Strain-Specific microRNA Reprogramming of Human Dendritic Cells by Probiotic and Commensal Escherichia coli Outer Membrane Vesicles.

  2026cites this paper
• Genetic and Molecular Epidemiological Characterization of ESBL-Producing Escherichia coli Isolated from University Students in Japan

  2026cites this paper
• Study on drug resistance, biofilm formation, phylogenetic and virulence gene analysis of Escherichia coli from diarrheic lambs

  2026cites this paper
• The Resistance-Nodulation-Division efflux pump EefABC is highly conserved within lineages of E. coli commonly associated with infection

  2026cites this paper
• Whole-genome analysis of five Escherichia coli strains isolated from focal duodenal necrosis in laying hens reveals genetic similarities to the E. coli O25:H4 ST131 strain

  2025cites this paper
• Antimicrobial resistance in community-acquired enteric pathogens among children aged ≤ 10-years in low-and middle-income countries: a systematic review and meta-analysis

  2025cites this paper
• Current Insights into Antibiotic Resistance in Uropathogenic Escherichia coli and Interventions Using Selected Bioactive Phytochemicals

  2025cites this paper
• A Molecular Snapshot of Clinical Extra-Intestinal Escherichia coli strains in South India - Virulence Factors, Phylogrouping and Resistance Trends.

  2025cites this paper
• Advancing Understanding of Escherichia coli Pathogenicity in Preterm Neonatal Sepsis

  2025cites this paper
• Bursts of reproduction can create genetic structure in frequently recombining bacterial populations

  2025cites this paper
• Investigations of Escherichia coli ST131 and H30Rx subclone from clinical samples.

  2025cites this paper
• Distribution of Clba Gene and Its Correlation With Antimicrobial Resistance Patterns in MDR E. coli From Diverse Host Groups

  2025cites this paper
• Molecular characterization of uropathogenic Escherichia coli (UPEC) strains isolated from companion dogs and cats in Korea

  2025cites this paper
• Prevalence, Phylogenetic Distribution, Antimicrobial Resistance, and Genetic Relatedness of Extraintestinal Pathogenic E. coli (ExPEC) Strains Isolated from Beef Cattle and Slaughterhouse Environment

  2025cites this paper
• Characterizing the resistome of Escherichia coli isolated from farmed white-tailed deer (Odocoileus virginianus) in Florida, United States

  2025cites this paper
• Extended-spectrum β-lactamase-producing Escherichia coli isolated from captive primates: characteristics and horizontal gene transfer ability analysis

  2025cites this paper
• Antibacterial Potential of Actinomycete Extracts and Characterization of β‐Lactamase‐Producing Multidrug‐Resistant Uropathogenic Escherichia coli

  2025cites this paper
• Virulence genes, antimicrobial resistance profiles and phylogroups of Shiga toxin-producing Escherichia coli and atypical enteropathogenic Escherichia coli isolates from dairy cattle in South Africa

  2025cites this paper
• Avian Pathogenic Escherichia coli: Advances in Pathogenesis, Diagnosis, and Control

  2025cites this paper
• Diarrheagenic and ESBL Potential of Escherichia coli From Publicly Shared Common Touch Surfaces

  2025cites this paper
• Clonal Diversity of Extraintestinal Pathogenic Escherichia coli Strains Isolated from Canine Urinary Tract Infections in Brazil

  2025cites this paper
• Avian pathogenic Escherichia coli (APEC) isolated from chicks and embryos in the hatchery

  2025cites this paper
• Food products confiscated from air passengers travelling from third countries into the European Union: Microbiological analyses and genomic characterization of zoonotic and multiresistant bacteria.

  2025cites this paper
• Molecular Epidemiology and Antibiotic Resistance Associated with Avian Pathogenic Escherichia coli in Shanxi Province, China, from 2021 to 2023

  2025cites this paper
• Epidemiological and molecular characteristics of extraintestinal pathogenic escherichia coli isolated from diseased cattle and sheep in Xinjiang, China from 2015 to 2019

  2025cites this paper
• Commensal Escherichia coli inhibits the growth and modulates the fitness, virulence, and antimicrobial resistance of Salmonella Heidelberg in vitro

  2025cites this paper
• First report of Escherichia albertii in Iran: a case study highlighting diagnostic challenges in pediatric gastroenteritis

  2025cites this paper
• Determining the pathogenicity of uropathogenic Escherichia coli strains in the Galleria mellonella larvae model

  2025cites this paper
• Differences in tests of phenotypic colistin resistance in clinical Escherichia coli isolates from poultry and their genetic diversity.

  2025cites this paper
• Genomic Analysis of Antibiotic Resistance and Virulence Profiles in Escherichia coli Linked to Sternal Bursitis in Chickens: A One Health Perspective

  2025cites this paper
• Multidrug-resistant E. Coli in wastewater sources: a comparative study and identification of resistance hotspots

  2025influential citation
• Detection of ESBL-producing Escherichia coli in poultry from Tamaulipas, Mexico.

  2025cites this paper
• Phylogenetic characterisation, virulence factors, and multi-drug resistance of Escherichia coli strains isolated from faeces of feral pigeons (Columba Livia forma urbana)

  2025cites this paper
• Investigating the effect of sub MIC concentrations of ciprofloxacin, ceftriaxone and imipenem on the expression of virulence and toxin-antitoxin genes of Escherichia coli strains isolated from blood infections in leukemia patients.

  2025cites this paper
• PATH-SAFE Consortium Recommendations for Genomic Surveillance of Food-Borne Diseases Escherichia Coli and Listeria Monocytogenes

  2025cites this paper
• The Pathogenicity Traits of Avian Pathogenic E. coli (APEC) O25-ST131 Associated with Avian Colibacillosis in Georgia Poultry and their Genotypic and Phenotypic Overlap with other ExPEC.

  2025cites this paper
• Comprehensive molecular and phenotypic profiling of uropathogenic Escherichia coli in a Honduran healthcare setting: virulence, resistance and phylogeny

  2025cites this paper
• Phylogenetic groups and extraintestinal virulence genes of inflow Escherichia coli entering a municipal drinking water treatment facility (St. Paul, MN, USA)

  2025cites this paper
• Antimicrobial Susceptibility Profiles of Commensal Escherichia coli Isolates from Turkeys in Hungarian Poultry Farms Between 2022 and 2023

  2025cites this paper
• Emergence of multidrug resistant Escherichia coli coharboring fosA3 and ESBL genes from retail ducks along slaughter line.

  2025cites this paper
• Comparative genomic and phenotypic description of Escherichia ruysiae: a newly identified member of the gut microbiome of the domestic dog

  2025cites this paper
• Antimicrobial Susceptibilities, Its Resistance Mechanisms, Virulence Determinants and Phylogenetic Groups of Escherichia coli Isolated From Different Clinical Animal Samples

  2025cites this paper
• Molecular Identification of Escherichia coli Isolated from Street Foods: Global Evidence and Public Health Implications

  2025cites this paper
• Characterization of urinary Escherichia coli isolates in HIV-seropositive women with asymptomatic bacteriuria in Western Ghana

  2025cites this paper
• Determination of Phylogroups, Pathotypes and Antibiotic Resistance Profiles of E. coli Isolates from Freshwater and Wastewater in the City of Panama

  2025cites this paper
• A virulent escherichia coli O121-B2-ST131 strain causes hemorrhagic pneumonia in mink: evidence from pathogenicity and animal challenge experiments

  2025cites this paper
• Limited clonality but widespread plasmid sharing of ESBL-producing E. coli between humans and the environment of northeastern Slovenia

  2025cites this paper
• Occurrence of antimicrobial resistance, integrons and virulence genes in Escherichia coli isolated from drinking water in Van, Turkiye: a cross-sectional study

  2025cites this paper
• Emergence, Spread of Antimicrobial-Resistant Bacteria and Phylogenetic Relationships in Coastal Ecosystems—Gastropod Phorcus lineatus as a Bioindicator

  2025cites this paper
• Effect of Using Different Proportions of Clove Oil on the Quality Characteristics of Breast Meat Cuts of Broiler Chickens Stored in Cold Storage

  2025cites this paper
• Association of substance use and vaginal infection with UTI in adolescent pregnant patients: a retrospective study

  2025cites this paper
• Serogrouping and Molecular Characterization of ESBL-Producing Avian Pathogenic Escherichia coli from Broilers and Turkeys with Colibacillosis in Algeria

  2025cites this paper
• Identification of Phylogenetic Groups and Antibiotic Resistance in Escherichia coli Isolated from Urinary Tract Infections in Basrah, Iraq

  2025cites this paper
• Agriculturally Sourced Multidrug-Resistant Escherichia coli for Use as Control Strains

  2025cites this paper
• Comparative genomics of clinical hybrid Escherichia coli strains in Norway.

  2025cites this paper
• When E. coli strikes: a necropsy analysis of a juvenile giraffe’s fatal infection

  2025cites this paper
• Prevalence of Shiga-Toxigenic Escherichia coli in Bovine Manure in the Mid-Atlantic Region of the United States

  2025cites this paper
• Occurrence of multidrug resistant/ESBL-producing Escherichia coli isolates belonging to high-risk clones from healthy one-day-old broiler and layer chicks without in ovo or day-of-hatch antibiotic administration.

  2025cites this paper
• Antimicrobial resistance and genetic diversity of Escherichia coli isolated from marine bivalves

  2025cites this paper
• Distribution of phylogroups and antibiotic resistance patterns of ESBL-producing Escherichia coli strains isolated from chicken meat in Tamaulipas, Mexico.

  2025cites this paper
• Virulence genes and phylogenetic analysis of antibiotic-resistant Escherichia coli isolated from pig slaughterhouses in Banten Province, Indonesia

  2025cites this paper
• Characterization of multidrug-resistant Escherichia coli isolated from clinical (UPEC) and environmental samples

  2025cites this paper
• Virulence and Antibiotic Resistance of aEPEC/STEC Escherichia coli Pathotypes with Serotype Links to Shigella boydii 16 Isolated from Irrigation Water

  2025cites this paper
• Impact of vaccination on the ecology of Escherichia coli in commercial Turkey production

  2025cites this paper
• Uropathogenic Escherichia coli Associated with Risk of Urosepsis—Genetic, Proteomic, and Metabolomic Studies

  2025cites this paper
• Genomic epidemiology of avian pathogenic Escherichia coli in two broiler colibacillosis outbreaks in Finland.

  2025cites this paper
• Phylogroup Homeostasis of Escherichia coli in the Human Gut Reflects the Physiological State of the Host

  2025cites this paper
• Molecular detection of the Escherichia coli heme-utilization gene A virulence factor in E. coli isolated from the feces of horses in Sumbawa island, Indonesia

  2025influential citation
• Diversity of Environmental Escherichia coli in Subtropical Freshwater Systems of South Africa

  2025influential citation
• Prevalence of potentially pathogenic and antimicrobial-resistant Escherichia coli in raw milk and dairy products in Egypt

  2025cites this paper
• Phenotypic characterization and complete genome of a tumorigenic pathobiont Escherichia coli LI60C3

  2025cites this paper
• Potential of emerging therapeutic alternatives in bovine mastitis prevention and control

  2025cites this paper
• Uropathogenic Escherichia coli (UPEC) that hides its identity: features of LC2 and EC73 strains from recurrent urinary tract infections

  2025cites this paper
• Genomic characterization of Escherichia coli with a polyketide synthase (pks) island isolated from ulcerative colitis patients

  2025cites this paper
• Analysis of phylogroups, biofilm formation, virulence factors, antibiotic resistance and molecular typing of uropathogenic Escherichia coli strains isolated from patients with recurrent and non-recurrent urinary tract infections

  2025cites this paper
• Investigating the effects of vitamin D3 and 5-aminosalicylic acid (Mesalazine) on the expression of virulence determinants in Escherichia coli isolated from patients with IBD and colorectal cancer

  2025cites this paper
• The prevalent dynamic and genetic characterization of mcr-1 encoding multi-drug resistant Escherichia coli strains recovered from poultry in Hebei, China.

  2024cites this paper
• Genomic analysis of multidrug-resistant Escherichia coli from Urban Environmental water sources in Accra, Ghana, Provides Insights into public health implications

  2024cites this paper
• Molecular Markers and Antimicrobial Resistance Patterns of Extraintestinal Pathogenic Escherichia coli from Camel Calves Including Colistin-Resistant and Hypermucoviscuous Strains

  2024cites this paper
• Multidrug-resistant phenotypes of genetically diverse Escherichia coli isolates from healthy domestic cats

  2024cites this paper
• Stingless bee honey: Nutritional, physicochemical, phytochemical and antibacterial validation properties against wound bacterial isolates

  2024cites this paper
• Azithromycin resistance genes in clinically-isolated Escherichia coli and their relationship with those from wastewater

  2024cites this paper
• Integrons and multidrug resistance across phylogenetic groups of clinical isolates of Escherichia coli

  2024cites this paper
• The resistance patterns and molecular characteristics of ESBL/AmpC-producing Escherichia coli from captive panda ecosystem in China.

  2024cites this paper
• Antimicrobial Resistance and Molecular Characterization of Escherichia coli from Healthy Chickens in Shandong, China from 2009 to 2014

  2024cites this paper
• Simultaneous detection of phylogroups and ESBL genes in E. coli using Multiplex PCR

  2024influential citation
• Rabbits as a Reservoir of Multidrug-Resistant Escherichia coli: Clonal Lineages and Public Health Impact

  2024cites this paper
• The biological function of the type II toxin-antitoxin system ccdAB in recurrent urinary tract infections.

  2024cites this paper
• High prevalence of plasmid-mediated quinolone resistance in escherichia coli strains producing extended-spectrum beta-lactamases isolated from faeces and urine of pregnant women with acute cystitis

  2024cites this paper
• First detection and characterization of mcr-1 colistin resistant E. coli from wild rat in Bangladesh

  2024cites this paper
• Polyvalent Bacterial Lysate with Potential Use to Treatment and Control of Recurrent Urinary Tract Infections

  2024cites this paper
• Unveiling Antibiotic Resistance, Clonal Diversity, and Biofilm Formation in E. coli Isolated from Healthy Swine in Portugal

  2024cites this paper
• Investigation of the phylogenetic groups, pathotypes, and clonality of extended spectrum β-lactamase encoding Escherichia coli strains in the intestine of broilers during rearing periods

  2024cites this paper
• A new in vivo model of intestinal colonization using Zophobas morio larvae: testing hyperepidemic ESBL- and carbapenemase-producing Escherichia coli clones

  2024cites this paper
• Molecular Characterization of Extended Spectrum β-Lactamase -Producing Escherichia coli: Insights into the O25b-ST131 Clone in Mexican Urinary Tract Infections

  2024cites this paper