Serial two-photon tomography: an automated method for ex-vivo mouse brain imaging

T. Ragan,L. Kadiri,K. Venkataraju,K. Bahlmann,J. Sutin,Julian Taranda,Ignacio Arganda-Carreras,Yongsoo Kim,H. Seung,P. Osten

Published 2011 in Nature Methods

ABSTRACT

Here we describe an automated method, named serial two-photon (STP) tomography, that achieves high-throughput fluorescence imaging of mouse brains by integrating two-photon microscopy and tissue sectioning. STP tomography generates high-resolution datasets that are free of distortions and can be readily warped in three dimensions, for example, for comparing multiple anatomical tracings. This method opens the door to routine systematic studies of neuroanatomy in mouse models of human brain disorders.

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