Identification and characterization of microRNAs in oilseed rape (Brassica napus) responsive to infection with the pathogenic fungus Verticillium longisporum using Brassica AA (Brassica rapa) and CC (Brassica oleracea) as reference genomes.

No abstract is available for this paper.

• Publication year

  2014

• Venue

  New Phytologist

• Publication date

  2014-11-01

• Fields of study

  Biology, Medicine, Environmental Science

• Identifiers
  DOI 10.1111/nph.12934PMID 25132374
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

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  2012influential reference
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  2012cited by this paper
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  2012cited by this paper
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  2011cited by this paper
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  2011cited by this paper
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  2010cited by this paper
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  2006cited by this paper
• Posttranscriptional Induction of Two Cu/Zn Superoxide Dismutase Genes in Arabidopsis Is Mediated by Downregulation of miR398 and Important for Oxidative Stress Tolerance[W]

  2006influential reference
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  2006cited by this paper
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  2006cited by this paper
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  2006cited by this paper
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  2006cited by this paper
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  2005cited by this paper
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  2005cited by this paper
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  2004cited by this paper
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• Control of leaf morphogenesis by microRNAs

  2003cited by this paper
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  2003cited by this paper
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  2003cited by this paper
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  1999cited by this paper
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  1995cited by this paper
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  year unknowncited by this paper
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  year unknowncited by this paper

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