Genetic mapping reveals a candidate gene (ClFS1) for fruit shape in watermelon (Citrullus lanatus L.)

No abstract is available for this paper.

• Publication year

  2018

• Venue

  Theoretical and Applied Genetics

• Publication date

  2018-01-23

• Fields of study

  Agricultural and Food Sciences, Medicine, Biology

• Identifiers
  DOI 10.1007/s00122-018-3050-5PMID 29362832
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

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  1993influential reference
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  1978cited by this paper
• Interaction of sex, shape, and weight genes in watermelon.

  1945cited by this paper
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