Multi-scale correlation structure of gene expression in the brain

No abstract is available for this paper.

• Publication year

  2011

• Venue

  Neural Networks

• Publication date

  2011-11-01

• Fields of study

  Biology, Medicine, Computer Science

• Identifiers
  DOI 10.1016/j.neunet.2011.06.012PMID 21764550
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Explorer A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo

  2016cited by this paper
• Digital Atlasing and Standardization in the Mouse Brain

  2011cited by this paper
• A symmetrical Waxholm canonical mouse brain for NeuroMaps.

  2011cited by this paper
• Genome-wide atlas of transcription during maize development.

  2011cited by this paper
• A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo

  2011cited by this paper
• Mapping protein abundance patterns in the brain using voxelation combined with liquid chromatography and mass spectrometry.

  2010cited by this paper
• Areal and laminar differentiation in the mouse neocortex using large scale gene expression data.

  2010cited by this paper
• Next-generation genomics: an integrative approach

  2010cited by this paper
• Waxholm Space: An image-based reference for coordinating mouse brain research

  2010cited by this paper
• The HUDSEN Atlas: a three‐dimensional (3D) spatial framework for studying gene expression in the developing human brain

  2010cited by this paper
• An anatomic gene expression atlas of the adult mouse brain

  2009cited by this paper
• Genomic–anatomic evidence for distinct functional domains in hippocampal field CA1

  2009cited by this paper
• Genomic anatomy of the hippocampus.

  2008cited by this paper
• Geometric Interpretation of Gene Coexpression Network Analysis

  2008cited by this paper
• Automated mapping of large-scale chromatin structure in ENCODE

  2008cited by this paper
• Quantitative methods for genome-scale analysis of in situ hybridization and correlation with microarray data

  2008cited by this paper
• Allen reference atlas : a digital color brain atlas of the C57Black/6J male mouse

  2008cited by this paper
• Genome-wide atlas of gene expression in the adult mouse brain

  2007cited by this paper
• Brain architecture management system

  2007cited by this paper
• Insights from spatially mapped gene expression in the mouse brain.

  2007cited by this paper
• Neuroinformatics for Genome-Wide 3-D Gene Expression Mapping in the Mouse Brain

  2007cited by this paper
• Conservation and evolution of gene coexpression networks in human and chimpanzee brains

  2006cited by this paper
• Towards the integration of spatially and temporally resolved murine gene expression databases.

  2006cited by this paper
• A General Framework for Weighted Gene Co-Expression Network Analysis

  2005cited by this paper
• A Gene-Coexpression Network for Global Discovery of Conserved Genetic Modules

  2003cited by this paper
• Binary tree-structured vector quantization approach to clustering and visualizing microarray data

  2002cited by this paper
• Brain Architecture: Understanding the Basic Plan

  2002cited by this paper
• Systematic determination of patterns of gene expression during Drosophila embryogenesis

  2002cited by this paper

• An interactive 3D atlas of gene expression in the mouse brain

  2026cites this paper
• Cortical gradient perturbation in attention deficit hyperactivity disorder correlates with neurotransmitter‐, cell type‐specific and chromosome‐ transcriptomic signatures

  2024cites this paper
• Microarray Gene Expression Analysis Using QR Decomposition, Machine Learning Algorithm, and Statistical Tool

  2024cites this paper
• Cortical gradient perturbation in attention deficit hyperactivity disorder correlates with neurotransmitter-, cell type-specific and chromosome- transcriptomic signatures

  2023cites this paper
• Exploratory Analysis of the Gene Expression Matrix Based on Dual Conditional Dimensionality Reduction

  2023cites this paper
• Topological clustering of multilayer networks

  2021cites this paper
• Distinct Genetic Signatures of Cortical and Subcortical Regions Associated with Human Memory

  2019cites this paper
• Supervised and Unsupervised End-to-End Deep Learning for Gene Ontology Classification of Neural In Situ Hybridization Images

  2019cites this paper
• Application of Computational Biology to Decode Brain Transcriptomes

  2019cites this paper
• A Revamp Approach for Training of HMM to Accelerate Classification of 16S rRNA Gene Sequences

  2018cites this paper
• Transactions on Computational Science XXXIII

  2018cites this paper
• Brain Transcriptome Databases: A User's Guide

  2018cites this paper
• Adar3 Is Involved in Learning and Memory in Mice

  2018cites this paper
• Adar 3 Is Involved in Learning and Memory in Mice

  2018cites this paper
• Effects of chronic spinal cord injury on relationships among ion channel and receptor mRNAs in mouse lumbar spinal cord

  2018cites this paper
• BrainScope: interactive visual exploration of the spatial and temporal human brain transcriptome

  2017cites this paper
• DeepBrain: Functional Representation of Neural In-Situ Hybridization Images for Gene Ontology Classification Using Deep Convolutional Autoencoders

  2017cites this paper
• Insulin Resistance as a Link between Amyloid-Beta and Tau Pathologies in Alzheimer’s Disease

  2017cites this paper
• Visual Analytics of Patterns of Gene Expression in the Developing Mammalian Brains

  2017cites this paper
• Comparing the Expression of Genes Related to Serotonin (5-HT) in C57BL/6J Mice and Humans Based on Data Available at the Allen Mouse Brain Atlas and Allen Human Brain Atlas

  2017influential citation
• Insulin resistance in Alzheimer's disease

  2017cites this paper
• Exploring Brain Transcriptomic Patterns: A Topological Analysis Using Spatial Expression Networks

  2016cites this paper
• Progress Towards Mammalian Whole-Brain Cellular Connectomics

  2016cites this paper
• Brain transcriptome atlases: a computational perspective

  2016cites this paper
• Discovery of Latent Factors in High-dimensional Data Using Tensor Methods

  2016cites this paper
• Discovering Neuronal Cell Types and Their Gene Expression Profiles Using a Spatial Point Process Mixture Model

  2016cites this paper
• Differential expression of transcriptional regulatory units in the prefrontal cortex of patients with bipolar disorder: potential role of early growth response gene 3

  2016cites this paper
• Feature-based Gene Classification and Region Clustering using Gene Expression Grid Data in Mouse Hippocampal Region

  2016influential citation
• Scalable streaming learning of dyadic relationships (שער נוסף בעברית: למידת יחסים דיאדיים ממידע זורם.)

  2015cites this paper
• Exploration and visualization of connectivity in the adult mouse brain.

  2015cites this paper
• Cell-type-specific neuroanatomy of cliques of autism-related genes in the mouse brain

  2015cites this paper
• Visualizing the spatial gene expression organization in the brain through non-linear similarity embeddings.

  2015cites this paper
• Cell-type-specific computational neuroanatomy, simulations from the sagittal and coronal Allen Brain Atlas

  2015cites this paper
• Molecular neuroanatomy: a generation of progress.

  2014cites this paper
• Quantitative trait loci mapping and gene network analysis implicate protocadherin‐15 as a determinant of brain serotonin transporter expression

  2014cites this paper
• The Allen Brain Atlas

  2014cites this paper
• Cell-type-specific transcriptomes and the Allen Atlas (II): discussion of the linear model of brain-wide densities of cell types

  2014cites this paper
• Cell-type–based model explaining coexpression patterns of genes in the brain

  2014cites this paper
• A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain.

  2014cites this paper
• Whole Brain Expression of Bipolar Disorder Associated Genes: Structural and Genetic Analyses

  2014cites this paper
• Cell-type-specific neuroanatomy of brain-wide expression of autism-related genes

  2014cites this paper
• Bridging psychology and genetics using large-scale spatial analysis of neuroimaging and neurogenetic data

  2014cites this paper
• The Allen Brai 62. The Allen Brain Atlas

  2014cites this paper
• Large scale digital atlases in neuroscience

  2014cites this paper
• Evaluation of heritable determinants of blood and brain serotonin homeostasis using recombinant inbred mice

  2014influential citation
• Evidence for the role of EPHX2 gene variants in anorexia nervosa

  2013cites this paper
• Computational neuroanatomy and co-expression of genes in the adult mouse brain, analysis tools for the Allen Brain Atlas

  2013cites this paper
• FuncISH: learning a functional representation of neural ISH images

  2013cites this paper
• Co-expression Profiling of Autism Genes in the Mouse Brain

  2013cites this paper
• Cell-type-specific microarray data and the Allen atlas: quantitative analysis of brain-wide patterns of correlation and density

  2013cites this paper
• Localizing Genes to Cerebellar Layers by Classifying ISH Images

  2012cites this paper
• Neural networks including microRNAs

  2012cites this paper
• Multi-scale, multi-modal neural modeling and simulation

  2011cites this paper