Group-specific 16S rRNA hybridization probes to describe natural communities of methanogens

No abstract is available for this paper.

• Publication year

  1994

• Venue

  Applied and Environmental Microbiology

• Publication date

  1994-04-01

• Fields of study

  Biology, Medicine, Environmental Science

• Identifiers
  DOI 10.1128/aem.60.4.1232-1240.1994PMID 7517128PMCID PMC201464
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Quantification of methanogenic groups in anaerobic biological reactors by oligonucleotide probe hybridization

  1994cited by this paper
• Probing activated sludge with oligonucleotides specific for proteobacteria: inadequacy of culture-dependent methods for describing microbial community structure

  1993cited by this paper
• Use of rRNA fluorescence in situ hybridization for measuring the activity of single cells in young and established biofilms

  1993cited by this paper
• Microbial production and consumption of greenhouse gases: Methane, nitrogen oxides, and halomethanes

  1993cited by this paper
• Dominating Role of an Unusual Magnetotactic Bacterium in the Microaerobic Zone of a Freshwater Sediment

  1993cited by this paper
• Genus- and group-specific hybridization probes for determinative and environmental studies of sulfate-reducing bacteria

  1992cited by this paper
• Molecular and microscopic identification of sulfate-reducing bacteria in multispecies biofilms

  1992cited by this paper
• A detailed phylogeny for the Methanomicrobiales.

  1992cited by this paper
• Archaea in coastal marine environments.

  1992cited by this paper
• Characterization of three thermophilic strains of Methanothrix ("Methanosaeta") thermophila sp. nov. and rejection of Methanothrix ("Methanosaeta") thermoacetophila.

  1992cited by this paper
• Ribosomal RNA Analysis of Microorganisms as They Occur in Nature

  1992cited by this paper
• The ribosomal database project

  1992cited by this paper
• Novel major archaebacterial group from marine plankton

  1992cited by this paper
• Development and application of nucleic acid probes

  1991cited by this paper
• Unusual methanogenic flora of a wood‐fermenting anaerobic bioreactor

  1991cited by this paper
• Fluorescent-oligonucleotide probing of whole cells for determinative, phylogenetic, and environmental studies in microbiology

  1990cited by this paper
• Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya.

  1990cited by this paper
• Basic local alignment search tool.

  1990influential reference
• Methanosaeta concilii gen. nov. sp. nov. ("Methanothrix concilii") and Methanosaeta thermoacetophila nom. rev., comb. nov.?

  1990cited by this paper
• Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations

  1990influential reference
• Microbial H2/CO2 acetogenesis in animal guts: nature and nutritional significance.

  1990cited by this paper
• Occurrence of sulphate-reducing bacteria in human faeces and the relationship of dissimilatory sulphate reduction to methanogenesis in the large gut.

  1988cited by this paper
• Transfer of Bacteroides succinogenes (Hungate) to Fibrobacter gen. nov. as Fibrobacter succinogenes comb. nov. and Description of Fibrobacter intestinalis sp. nov.

  1988cited by this paper
• Phylogenetically based studies of microbial ecosystem perturbation

  1988cited by this paper
• Use of phylogenetically based hybridization probes for studies of ruminal microbial ecology

  1988cited by this paper
• Control of Interspecies Electron Flow during Anaerobic Digestion: Significance of Formate Transfer versus Hydrogen Transfer during Syntrophic Methanogenesis in Flocs

  1988cited by this paper
• Phylogenetic group-specific oligodeoxynucleotide probes for identification of single microbial cells

  1988cited by this paper
• Control of Interspecies Electron Flow during Anaerobic Digestion: Role of Floc Formation in Syntrophic Methanogenesis

  1988cited by this paper
• Microbial ecology and evolution: a ribosomal RNA approach.

  1986cited by this paper
• Sulfate Reduction Relative to Methane Production in High-Rate Anaerobic Digestion: Microbiological Aspects

  1986cited by this paper
• Sulfate Reduction Relative to Methane Production in High-Rate Anaerobic Digestion: Technical Aspects

  1986cited by this paper
• Recent developments in hydrogen management during anaerobic biological wastewater treatment.

  1986cited by this paper
• The Analysis of Natural Microbial Populations by Ribosomal RNA Sequences

  1986cited by this paper
• Thermodynamics of H2-consuming and H2-producing metabolic reactions in diverse methanogenic environments under in situ conditions

  1986cited by this paper
• Gas Metabolism Evidence in Support of the Juxtaposition of Hydrogen-Producing and Methanogenic Bacteria in Sewage Sludge and Lake Sediments

  1985cited by this paper
• Interactions between methanogenic and sulfate-reducing bacteria in sediments

  1985cited by this paper
• Influence of pH on Terminal Carbon Metabolism in Anoxic Sediments from a Mildly Acidic Lake

  1984cited by this paper
• Methanogens: reevaluation of a unique biological group

  1979cited by this paper
• Methanogenic bacteria

  1978cited by this paper
• Rates of formation and thermal stabilities of RNA:DNA and DNA:DNA duplexes at high concentrations of formamide.

  1977cited by this paper

• Flow cytometric quantification of methanogens in anaerobic digestate

  2025cites this paper
• Influence of Oregano Essential Oil on the Rumen Microbiome of Organically Reared Alpine Goats: Implications for Methanobacteria Abundance

  2025cites this paper
• Kinetics and dynamics of dissolved organic nitrogen, and nitrogen cycling genes in the soil profile of an irrigated vineyard with surface-applied organic amendments

  2025cites this paper
• Minisyncoccus archaeiphilus gen. nov., sp. nov., a mesophilic, obligate parasitic bacterium and proposal of Minisyncoccaceae fam. nov., Minisyncoccales ord. nov., Minisyncoccia class. nov. and Minisyncoccota phyl. nov. formerly referred to as Candidatus Patescibacteria or candidate phyla radiation

  2025cites this paper
• Impact of Anaerobic Cold Storage on Subseafloor Microbial Communities

  2025cites this paper
• Effect of an ozone pre-treatment on dark fermentation: Influence on the microbiota and pathogen removal.

  2025cites this paper
• Effect of Solidified Carbon Dioxide Pretreatment on Chlorella vulgaris Biomass Prior to Anaerobic Digestion

  2025cites this paper
• Methanogenic symbionts of anaerobic ciliates are host and habitat specific

  2024cites this paper
• Characterization and Performance Evaluation of Anaerobic Night Soil Biodegrading Inoculum

  2024cites this paper
• Methanobrevibacter massiliense and Pyramidobacter piscolens Co-Culture Illustrates Transkingdom Symbiosis

  2024cites this paper
• Fluorescently probing anaerobic digester sludge: Measuring single-cell anabolic activity in methanogens (Methanosarcina and Methanothermobacter) with deuterium-labeled Raman analysis.

  2024cites this paper
• Inhibitory effects of long chain fatty acids on anaerobic sludge treatment: biomass adaptation and microbial community assessment

  2024cites this paper
• Methanobrevibacter smithii cell variants in human physiology and pathology: A review

  2024cites this paper
• Source of Methanogens and Characteristics of Methane Emission in Two Wastewater Treatment Plants in Xi’an

  2024cites this paper
• Functional and molecular approaches for studying and controlling microbial communities in anaerobic digestion of organic waste: a review

  2023cites this paper
• Lipidomic diversity and proxy implications of archaea from cold seep sediments of the South China Sea

  2023cites this paper
• Effect of Coconut Fiber as an Inert Media on Hybrid Upflow Anaerobic Sludge Blanket Reactor

  2023cites this paper
• The role of agricultural drainage, storm-events, and natural filtration on the biogeochemical cycling capacity of aquatic and sediment environments in Lake Erie's drainage basin.

  2023cites this paper
• Anaerobic Co-digestion of Waste Activated Sludge with Municipal Solid Waste: Methane Production, Heavy Metal Decrease, Microbial Community, and Energy Production

  2023cites this paper
• Agricultural land management alters the biogeochemical cycling capacity of aquatic and sediment environments

  2023cites this paper
• Methane production by Methanothrix thermoacetophila via direct interspecies electron transfer with Geobacter metallireducens

  2023cites this paper
• Visualization of metabolites and microbes at high spatial resolution using MALDI mass spectrometry imaging and in situ fluorescence labeling

  2023cites this paper
• Microbial Behavior and Influencing Factors in the Anaerobic Digestion of Distiller: A Comprehensive Review

  2023cites this paper
• Rumen microbial community and milk quality in Holstein lactating cows fed olive oil pomace as part in a sustainable feeding strategy.

  2023cites this paper
• Antibiotics inhibit methanogenesis during municipal solid waste decomposition.

  2023cites this paper
• Effect of Acid Whey Pretreatment Using Ultrasonic Disintegration on the Removal of Organic Compounds and Anaerobic Digestion Efficiency

  2022cites this paper
• Methanosaeta and “Candidatus Velamenicoccus archaeovorus”

  2022cites this paper
• Reductive Cr(VI) Removal under Different Reducing and Electron Donor Conditions—A Soil Microcosm Study

  2022cites this paper
• Actin cytoskeleton and complex cell architecture in an Asgard archaeon

  2022cites this paper
• Novel Cross-domain Symbiosis between Candidatus Patescibacteria and Hydrogenotrophic Methanogenic Archaea Methanospirillum Discovered in a Methanogenic Ecosystem

  2022influential citation
• Microbial Mediation of Carbon, Nitrogen, and Sulfur Cycles During Solid Waste Decomposition

  2022cites this paper
• Thermophilic-mesophilic temperature phase anaerobic co-digestion of sewage sludge, wine vinasse and poultry manure: Effect of hydraulic retention time on mesophilic-methanogenic stage

  2022cites this paper
• The Control Strategy and Kinetics of VFAs Production in an ASBR Reactor Treating Low-Strength Mariculture Wastewater

  2022cites this paper
• Rapid identification of clinically interesting methanogens using an improved MALDI-TOF-MS assay

  2022cites this paper
• Anaerobes and methanogens dominate the microbial communities in water harvesting ponds used by Kenyan rural smallholder farmers.

  2022cites this paper
• The succession of microorganisms and organics in the process of methane generation by co‐degradation of anthracite and rice straw

  2022cites this paper
• Effect of Pharmaceutical Sludge Pre-Treatment with Fenton/Fenton-like Reagents on Toxicity and Anaerobic Digestion Efficiency

  2022influential citation
• Rigid bioplastics shape the microbial communities involved in the treatment of the organic fraction of municipal solid waste

  2022cites this paper
• Convergent Community Assembly among Globally Separated Acidic Cave Biofilms

  2022cites this paper
• First Detection of Methanogens in Orthopedic Prosthesis Infection: A Four-Case Founding Series

  2022cites this paper
• Ameliorating effect of nitrate on nitrite inhibition for denitrifying P-accumulating organisms.

  2021cites this paper
• Biohythane: An emerging future fuel

  2021cites this paper
• Cashew nut shell liquid potentially mitigates methane emission from the feces of Thai native ruminant livestock by modifying fecal microbiota.

  2021cites this paper
• Matrix-assisted laser desorption ionization time-of-flight mass spectrometry identification of methanogens of clinical interest

  2021cites this paper
• Triangulation of microbial fingerprinting in anaerobic digestion reveals consistent fingerprinting profiles

  2021cites this paper
• Efficiency of sweet whey fermentation with psychrophilic methanogens

  2021influential citation
• THE MICROBIAL COMMUNITY COMPOSITION OF AN ANAEROBIC REACTOR IN A SUGAR INDUSTRY WASTEWATER TREATMENT PLANT-FROM CLASSICAL TO NEW APPROACHES

  2021cites this paper
• Taxonomy and Molecular Phylogeny of Two New Species of Prostomatean Ciliates With Establishment of Foissnerophrys gen. n. (Alveolata, Ciliophora)

  2021cites this paper
• Biomethanation of Napier Grass Mono-digestion in Single-Stage Anaerobic Completely Stirred Tank Reactors Seeded with Cow Manure and Anaerobic Sludge

  2021cites this paper
• Microbial functions and soil nitrogen mineralisation processes in the soil of a cool temperate forest in northern Japan

  2021cites this paper
• Biomethanation of Napier Grass Mono-digestion in Single-Stage Anaerobic Completely Stirred Tank Reactors Seeded with Cow Manure and Anaerobic Sludge

  2021cites this paper
• Marine Group-II archaea dominate particle-attached as well as free-living archaeal assemblages in the surface waters of Kongsfjorden, Svalbard, Arctic Ocean

  2021cites this paper
• Characterization of archaeal and bacterial communities thriving in methane-seeping on-land mud volcanoes, Niigata, Japan

  2021cites this paper
• Micro-catchment water harvesting-based rehabilitation ameliorated soil microbial abundance, diversity and function in a degraded dryland

  2021cites this paper
• Taxonomic and functional analyses of intact microbial communities thriving in extreme, astrobiology-relevant, anoxic sites

  2021cites this paper
• The Effect of Static Magnetic Field on Methanogenesis in the Anaerobic Digestion of Municipal Sewage Sludge

  2021influential citation
• Ozonation of sewage sludge prior to anaerobic digestion led to Methanosaeta dominated biomethanation

  2021cites this paper
• Planktonic Archaeal Ether Lipid Origins in Surface Waters of the North Pacific Subtropical Gyre

  2021cites this paper
• Phosphate-Arsenic Interactions in Halophilic Microorganisms of the Microbial Mat from Laguna Tebenquiche: from the Microenvironment to the Genomes

  2021cites this paper
• Microbial Processes of Carbon and Sulfur Cycles in Sediments of the Russian Sector of the Baltic Sea

  2021cites this paper
• Prospects for multi-omics in the microbial ecology of water engineering.

  2021cites this paper
• Anaerobic biofilm enriched with an ammonia tolerant methanogenic consortium to improve wastewater treatment in the fishing industry

  2021cites this paper
• Influence of preparation of Sida hermaphrodita silages on its conversion to methane

  2021cites this paper
• Potential impacts of oxygen impurities in carbon capture and storage on microbial community composition and activity

  2021cites this paper
• Methanogen Community Dynamics and Methanogenic Function Response to Solid Waste Decomposition

  2021cites this paper
• Metabolically Active Prokaryotic Complex in Grassland and Forests’ Sod-Podzol under Polycyclic Aromatic Hydrocarbon Influence

  2021cites this paper
• Optimisation of methane fermentation as a valorisation method for food waste products

  2021cites this paper
• Niche differentiation of phenol-degrading microorganisms in UASB granular sludge as revealed by fluorescence in situ hybridization

  2021cites this paper
• Methane Generation from Anthracite by Fungi and Methanogen Mixed Flora Enriched from Produced Water Associated with the Qinshui Basin in China

  2021cites this paper
• Molecular Microbial Community Analysis as an Analysis Tool for Optimal Biogas Production

  2021cites this paper
• DNA Metabarcoding for the Characterization of Terrestrial Microbiota—Pitfalls and Solutions

  2021cites this paper
• Effect of static magnetic field on microbial community during anaerobic digestion.

  2020cites this paper
• The indoor environment - a potential source for intact human-associated anaerobes

  2020cites this paper
• Microbial community composition and metabolic functions in landfill leachate from different landfills of China.

  2020cites this paper
• Methanogenic crude oil-degrading microbial consortia are not universally abundant in anoxic environments

  2020cites this paper
• Relationships between nitrogen cycling microbial community abundance and composition reveal the indirect effect of soil pH on oak decline

  2020cites this paper
• Digestive tract methanodrome: Physiological roles of human microbiota-associated methanogens.

  2020cites this paper
• Biopolymers modulate microbial communities in municipal organic waste digestion.

  2020cites this paper
• How We Did it - The Path Leading to the Discovery of the Ammonia-oxidizing Archaea.

  2020cites this paper
• Leachate microbiome profile reveals bacteria, archaea and eukaryote dynamics and methanogenic function during solid waste decomposition.

  2020cites this paper
• Bacterial Community Legacy Effects Following the Agia Zoni II Oil-Spill, Greece

  2020cites this paper
• Mineralization and nitrification: Archaea dominate ammonia-oxidising communities in grassland soils

  2020cites this paper
• Mainstream-sidestream wastewater switching promotes anammox nitrogen removal rate in organic-rich, low-temperature streams

  2020cites this paper
• Extremely halophilic archaeal communities are resilient to short‐term entombment in halite

  2020cites this paper
• Effect of a Sono-Thermal Pre-treatment Over Methane Production, Specific Activities and the Microbial Community of Sludge Anaerobic Digesters

  2020cites this paper
• Detection of Methanobrevobacter smithii and Methanobrevibacter oralis in Lower Respiratory Tract Microbiota

  2020cites this paper
• Rumen Methanogens Diversity Analysisin Indian Buffaloes Using PCR-DenaturingGradient Gel Electrophoresis

  2020cites this paper
• Effect of a Sono-Thermal Pre-treatment Over Methane Production, Specific Activities and the Microbial Community of Sludge Anaerobic Digesters

  2020cites this paper
• Space Station conditions are selective but do not alter microbial characteristics relevant to human health

  2019cites this paper
• The dominance of non-halophilic archaea in autotrophic ammonia oxidation of activated sludge under salt stress: A DNA-based stable isotope probing study.

  2019cites this paper
• The International Space Station selects for microorganisms adapted to the extreme environment, but does not induce genomic and physiological changes relevant for human health

  2019cites this paper
• Potential methane production and molecular characterization of bacterial and archaeal communities in a horizontal subsurface flow constructed wetland under cold and warm seasons.

  2019cites this paper
• Characterization of Anthracite-Degrading Methanogenic Microflora Enriched from Qinshui Basin in China

  2019cites this paper
• Nitrogen oxidation consortia dynamics influence the performance of full-scale rotating biological contactors.

  2019cites this paper
• Temperature effects on the first three years of soil ecosystem development on volcanic ash

  2019cites this paper
• Characterisation of microbial communities of drill cuttings piles from offshore oil and gas installations.

  2019cites this paper
• Co-culture of Methanobrevibacter smithii with enterobacteria during urinary infection

  2019cites this paper
• Anaerobic oxidation of ethane by archaea from a marine hydrocarbon seep

  2019cites this paper
• Application of ethanol-type fermentation in establishment of direct interspecies electron transfer: A practical engineering case study

  2019cites this paper
• A strategy for enhancing anaerobic digestion of waste activated sludge: Driving anodic oxidation by adding nitrate into microbial electrolysis cell.

  2019cites this paper