Metabolomics for plant stress response.

No abstract is available for this paper.

• Publication year

  2008

• Venue

  Physiologia Plantarum : An International Journal for Plant Biology

• Publication date

  2008-02-01

• Fields of study

  Biology, Medicine, Chemistry, Environmental Science

• Identifiers
  DOI 10.1111/j.1399-3054.2007.01025.xPMID 18251861
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Comparison of sampling techniques for parallel analysis of transcript and metabolite levels in Saccharomyces cerevisiae

  2007cited by this paper
• Phosphorus Stress in Common Bean: Root Transcript and Metabolic Responses1[W][OA]

  2007influential reference
• Transcript and metabolite profiling during cold acclimation of Arabidopsis reveals an intricate relationship of cold-regulated gene expression with modifications in metabolite content.

  2007influential reference
• Predicting state transitions in the transcriptome and metabolome using a linear dynamical system model

  2007cited by this paper
• Metabolic flux analysis of a glycerol-overproducing Saccharomyces cerevisiae strain based on GC-MS, LC-MS and NMR-derived C-labelling data.

  2007cited by this paper
• A guide to biochemical systems modeling of sphingolipids for the biochemist.

  2007cited by this paper
• Stable isotope assisted assignment of elemental compositions for metabolomics.

  2007cited by this paper
• The metabolomics of (+/-)-arecoline 1-oxide in the mouse and its formation by human flavin-containing monooxygenases.

  2007cited by this paper
• GC-EI-TOF-MS analysis of in vivo carbon-partitioning into soluble metabolite pools of higher plants by monitoring isotope dilution after 13CO2 labelling.

  2007cited by this paper
• Water and salinity stress in grapevines: early and late changes in transcript and metabolite profiles

  2007cited by this paper
• A metabonomic study of strain- and age-related differences in the Zucker rat.

  2007cited by this paper
• Development of a two-step screening ESI-TOF-MS method for rapid determination of significant stress-induced metabolome modifications in plant leaf extracts: the wound response in Arabidopsis thaliana as a case study.

  2007cited by this paper
• Highly-parallel metabolomics approaches using LC-MS for pharmaceutical and environmental analysis.

  2007cited by this paper
• Alteration of oxidative and carbohydrate metabolism under abiotic stress in two rice (Oryza sativa L.) genotypes contrasting in chilling tolerance.

  2007cited by this paper
• Metabolic flux analysis of a glycerol‐overproducing Saccharomyces cerevisiae strain based on GC‐MS, LC‐MS and NMR‐derived 13C‐labelling data

  2007cited by this paper
• The Pathway Tools cellular overview diagram and Omics Viewer

  2006cited by this paper
• Metabolomics technology and bioinformatics

  2006cited by this paper
• The Metabolic Response of Heterotrophic Arabidopsis Cells to Oxidative Stress1[W]

  2006influential reference
• Time-course metabolic profiling in Arabidopsis thaliana cell cultures after salt stress treatment*

  2006cited by this paper
• Bioinformatics Approaches to Integrate Metabolomics and Other Systems Biology Data

  2006cited by this paper
• Biological systems modeling and analysis: a biomolecular technique of the twenty-first century.

  2006cited by this paper
• Reactive oxygen species and temperature stresses: A delicate balance between signaling and destruction

  2006cited by this paper
• Metabolomics, modelling and machine learning in systems biology – towards an understanding of the languages of cells

  2006cited by this paper
• Metabolomic, proteomic and biophysical analyses of Arabidopsis thaliana cells exposed to a caesium stress. Influence of potassium supply.

  2006cited by this paper
• Abiotic stress, the field environment and stress combination.

  2006cited by this paper
• Gene expression and metabolite profiling of Populus euphratica growing in the Negev desert

  2005cited by this paper
• Elucidation of Gene-to-Gene and Metabolite-to-Gene Networks in Arabidopsis by Integration of Metabolomics and Transcriptomics*

  2005cited by this paper
• MetaCyc: a multiorganism database of metabolic pathways and enzymes

  2005cited by this paper
• Quantitative analysis of the microbial metabolome by isotope dilution mass spectrometry using uniformly 13C-labeled cell extracts as internal standards.

  2005cited by this paper
• KaPPA-View. A Web-Based Analysis Tool for Integration of Transcript and Metabolite Data on Plant Metabolic Pathway Maps1[w]

  2005cited by this paper
• Salinity stress adaptation competence in the extremophile Thellungiella halophila in comparison with its relative Arabidopsis thaliana.

  2005cited by this paper
• Comprehensive post-genomic data analysis approaches integrating biochemical pathway maps.

  2005cited by this paper
• Systems Rebalancing of Metabolism in Response to Sulfur Deprivation, as Revealed by Metabolome Analysis of Arabidopsis Plants1[w]

  2005cited by this paper
• Chemical derivatization and mass spectral libraries in metabolic profiling by GC/MS and LC/MS/MS.

  2005cited by this paper
• Liquid chromatography-mass spectrometry and 15N metabolic labeling for quantitative metabolic profiling.

  2005cited by this paper
• MetaCyc and AraCyc. Metabolic Pathway Databases for Plant Research1[w]

  2005cited by this paper
• Integrative gene-metabolite network with implemented causality deciphers informational fluxes of sulphur stress response.

  2005cited by this paper
• Metabolomics – the link between genotypes and phenotypes

  2004cited by this paper
• Reactive oxygen gene network of plants.

  2004cited by this paper
• Exploring the Temperature-Stress Metabolome of Arabidopsis1[w]

  2004cited by this paper
• Towards dissecting nutrient metabolism in plants: a systems biology case study on sulphur metabolism.

  2004cited by this paper
• Metabolite fingerprinting and profiling in plants using NMR.

  2004cited by this paper
• Making sense of the metabolome using evolutionary computation: seeing the wood with the trees.

  2004cited by this paper
• MIRACLE: mass isotopomer ratio analysis of U‐13C‐labeled extracts. A new method for accurate quantification of changes in concentrations of intracellular metabolites

  2004cited by this paper
• Process for the integrated extraction, identification and quantification of metabolites, proteins and RNA to reveal their co‐regulation in biochemical networks

  2004cited by this paper
• The role of analytical sciences in medical systems biology.

  2004cited by this paper
• MetaCyc: a multiorganism database of metabolic pathways and enzymes

  2004cited by this paper
• MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes.

  2004cited by this paper
• When Defense Pathways Collide. The Response of Arabidopsis to a Combination of Drought and Heat Stress1[w]

  2004cited by this paper
• A prominent role for the CBF cold response pathway in configuring the low-temperature metabolome of Arabidopsis.

  2004cited by this paper
• Metabolomic analysis of the consequences of cadmium exposure in Silene cucubalus cell cultures via 1H NMR spectroscopy and chemometrics.

  2003cited by this paper
• Quantitative metabolome analysis using capillary electrophoresis mass spectrometry.

  2003cited by this paper
• Plant metabolomics: large-scale phytochemistry in the functional genomics era.

  2003cited by this paper
• Metabolic fingerprinting of salt-stressed tomatoes.

  2003influential reference
• In vivo measurement of fluxes through metabolic pathways: the missing link in functional genomics and pharmaceutical research.

  2003cited by this paper
• Chemometric discrimination of unfractionated plant extracts analyzed by electrospray mass spectrometry.

  2003cited by this paper
• Metabolic flux analysis of the phenylpropanoid pathway in wound-healing potato tuber tissue using stable isotope-labeled tracer and LC-MS spectroscopy.

  2003cited by this paper
• Oxidative stress, antioxidants and stress tolerance.

  2002cited by this paper
• Systems Biology: A Brief Overview

  2002cited by this paper
• Integrated studies on plant biology using multiparallel techniques.

  2001cited by this paper
• Simultaneous analysis of metabolites in potato tuber by gas chromatography-mass spectrometry.

  2000cited by this paper
• Technical advance: simultaneous analysis of metabolites in potato tuber by gas chromatography-mass spectrometry.

  2000cited by this paper
• Metabolite profiling for plant functional genomics

  2000cited by this paper
• Evolutionary computation in medicine: an overview

  2000cited by this paper
• Identification of the peroxisomal targeting signal for cottonseed catalase.

  1997cited by this paper

• Exogenous melatonin on photosynthesis and physiological characteristics in maize under drought stress

  2026cites this paper
• Analyzing Plant Low-Molecular-Weight Polar Metabolites: A GC-MS Approach

  2026cites this paper
• Non-Targeted Metabolomics Analysis Reveals the Inhibition Mechanism of Ozone Treatment on Postharvest Blue Mold in Angelica sinensis

  2026cites this paper
• Metabolic reconfiguration and proline-mediated responses enhance citrus tolerance to combined water, light and heat stress

  2025cites this paper
• Metabolomics Profiling and Advanced Methodologies for Wheat Stress Research

  2025cites this paper
• Searching for a universal indicator of plant stress: a three-year study of three woody species in three environmental gradients in boreal forests

  2025cites this paper
• Precision Therapeutics Through Bioactive Compounds: Metabolic Reprogramming, Omics Integration, and Drug Repurposing Strategies

  2025cites this paper
• Biofertilization and Bioremediation—How Can Microbiological Technology Assist the Ecological Crisis in Developing Countries?

  2025cites this paper
• Phenotypic characterization and comparative non-targeted GC–MS-based metabolomic profiling of two contrasting seedling fonio millet (Digitaria exilis) cultivars: an insight to drought tolerance in small millets

  2025cites this paper
• Gut Metabolome in Companion Animal Nutrition—Linking Diets to Health

  2025cites this paper
• Metabolite Profiling and Association Analysis of Leaf Tipburn in Heat-Tolerant Bunching Onion Varieties

  2025cites this paper
• Biogenic nanoparticles for managing salinity stress-related crop and environmental risks: realistic applications and challenges

  2025cites this paper
• Comparative metabolomics reveal the biochemical basis of mulberry fruit decay during low temperature storage

  2025cites this paper
• Boosting Biotic Stress Resistance in Solanum melongena L.: The Role of Exogenous Chlorogenic Acid in Enhancing Secondary Metabolite Production

  2025cites this paper
• Meloidogyne incognita Significantly Alters the Cucumber Root Metabolome and Enriches Differential Accumulated Metabolites Regulating Nematode Chemotaxis and Infection

  2025cites this paper
• Mass-spectrometry based metabolomics: an overview of workflows, strategies, data analysis and applications

  2025cites this paper
• Unlocking Plant Resilience: Metabolomic Insights into Abiotic Stress Tolerance in Crops

  2025cites this paper
• Metabolome Profiling and Predictive Modeling of Dark Green Leaf Trait in Bunching Onion Varieties

  2025cites this paper
• Metabolomics of two ecologically important mangroves under salinity gradients identifies the role of key metabolites in their adaptive responses

  2025cites this paper
• Rhizospheric crosstalk: A mechanistic overview of how plant secondary metabolites alleviate abiotic stresses.

  2025cites this paper
• Tracing the concerted modulations in the metabolome and related metabolic pathways of tree species under simulated particulate matter stress through high-resolution NMR spectroscopy.

  2025cites this paper
• The interaction of nutrient uptake with biotic and abiotic stresses in plantsFA.

  2025cites this paper
• Metabolic responses to multi-stress: an update

  2025cites this paper
• Elevated temperature has more pronounced effect on anthesis tomato plant than cadmium stress and reduced nitrogen supply.

  2025cites this paper
• Decoding plant metabolomics: integrative insights into metabolic regulation

  2025cites this paper
• Environmental metabolomics reveals acclimatization mechanisms of European beech trees to natural altitudinal, light, and seasonal gradients.

  2025cites this paper
• Defense enzyme encoding gene and metabolite expression profiling in Salicornia brachiata Roxb. under different salinity

  2025cites this paper
• Nanotechnology for sustainable biotic stress management in plants

  2025cites this paper
• Comparative metabolic profiling of resistant and susceptible mungbean (Vigna radiata L. Wilczek) genotypes to elucidate the defense response against mungbean yellow mosaic virus (MYMV) disease

  2025cites this paper
• Comparative metabolites analysis of resistant, susceptible and wild rice species in response to bacterial blight disease

  2025cites this paper
• Developing Light‐Emitting Plants (LEPs) with SrAl2O4: Eu2+, Dy3+ by Using Pressure Infiltration, Optimal Conditions for Glowing and Plant Stress Response

  2025cites this paper
• A Novel Method to Classify and Study Chickpea Chlorotic Dwarf Virus (CpCDV) Strains Based on Evolutionary Diversity and Cis‐Regulatory Elements (CRE)

  2025cites this paper
• Applicability of metabolomics to improve sustainable grapevine production

  2024cites this paper
• The potential applications of cytokinins and cytokinin oxidase/dehydrogenase inhibitors for mitigating abiotic stresses in model and non-model plant species

  2024cites this paper
• Strategies for Achieving High and Sustainable Plant Productivity in Saline Soil Conditions

  2024cites this paper
• Suprathreshold Water Spray Stimulus Enhances Plant Defenses against Biotic Stresses in Tomato.

  2024cites this paper
• Metabolic profiling of plant and other natural products: Platforms, applications and quality evaluation

  2024cites this paper
• Sulfur assimilation and regulation of abiotic stress via OMICS

  2024cites this paper
• Identification of genes involved in cadmium ion tolerance in evolutionary Synechocystis sp. PCC 6803 tolerant to both cadmium and high light

  2024cites this paper
• The impact of alternative recycled and synthetic phosphorus sources on plant growth and responses, soil interactions and sustainable agriculture - lettuce (Lactuca sativa) as a case model.

  2024cites this paper
• Identification of Bioactive Secondary Metabolites in Citronella Grass Leaves (Cymbopogon nardus L.) against Curvularia andropogonis

  2024cites this paper
• Characterization of Arabidopsis aldolases AtFBA4, AtFBA5, and their inhibition by morin and interaction with calmodulin

  2024cites this paper
• Identification of Stress-Responsive Metabolites in Plants Using an Untargeted Metabolomics Approach.

  2024cites this paper
• Metabolomics-driven investigation of plant defense response against pest and pathogen attack.

  2024cites this paper
• Integrating evolutionary genomics of forest trees to inform future tree breeding amid rapid climate change

  2024cites this paper
• Recent advancement in mass based plant metabolomics: techniques, tools, and analytical approaches

  2024cites this paper
• Analysis of the Mechanism of Wood Vinegar and Butyrolactone Promoting Rapeseed Growth and Improving Low-Temperature Stress Resistance Based on Transcriptome and Metabolomics

  2024cites this paper
• The Performance of Growing-Media-Shaped Microgreens: The Growth, Yield, and Nutrient Profiles of Broccoli, Red Beet, and Black Radish

  2024cites this paper
• Bioaccumulation of Microcystin-LR and Induced Physio-Biochemical Changes in Rice (Oryza sativa L.) at Vegetative Stage under Hydroponic Culture Conditions

  2024cites this paper
• Surviving a Double-Edged Sword: Response of Horticultural Crops to Multiple Abiotic Stressors

  2024cites this paper
• Genome-wide characterization of the GPAT gene family in bean (Phaseolus vulgaris L.) and expression analysis under abiotic stress and melatonin

  2024cites this paper
• Twenty Years of 1H NMR Plant Metabolomics: A Way Forward toward Assessment of Plant Metabolites for Constitutive and Inducible Defenses to Biotic Stress.

  2024cites this paper
• Identification of responsive genes to multiple abiotic stresses in rice (Oryza sativa): a meta-analysis of transcriptomics data

  2024cites this paper
• Characterization of Arabidopsis aldolases AtFBA4 and AtFBA5; inhibition by morin and interaction with calmodulin

  2024cites this paper
• Transcriptome and metabolome analyses reveal that Bacillus subtilis BS-Z15 lipopeptides mycosubtilin homologue mediates plant defense responses

  2023cites this paper
• β-Cyclocitral-Mediated Metabolic Changes Optimize Growth and Defense Responses in Solanum lycopersicum L.

  2023cites this paper
• Species-Specific Secondary Metabolites from Primula veris subsp. veris Obtained In Vitro Adventitious Root Cultures: An Alternative for Sustainable Production

  2023cites this paper
• Understanding ayahuasca effects in major depressive disorder treatment through invitro metabolomics and bioinformatics

  2023cites this paper
• Combining nitrogen effects and metabolomics to reveal the response mechanisms to nitrogen stress and the potential for nitrogen reduction in maize

  2023cites this paper
• Dynamic Metabolic Changes in Arabidopsis Seedlings under Hypoxia Stress and Subsequent Reoxygenation Recovery

  2023cites this paper
• Transcriptome and metabolome response of eggplant against Ralstonia solanacearum infection

  2023cites this paper
• The growth inhibitory effects and non-targeted metabolomic profiling of Microcystis aeruginosa treated by Scenedesmus sp.

  2023cites this paper
• Comparative transcriptomic and proteomic analysis reveals common molecular factors responsive to heat and drought stresses in sweetpotaoto (Ipomoea batatas)

  2023cites this paper
• UPLC-QTOF-MS-Based Metabolomics and Antioxidant Capacity of Codonopsis lanceolata from Different Geographical Origins

  2023cites this paper
• Foliar Selenium Nanoparticles Application Promotes the Growth of Maize (Zea mays L.) Seedlings by Regulating Carbon, Nitrogen and Oxidative Stress Metabolism

  2023cites this paper
• Metabolomics analysis unveils important changes involved in the salt tolerance of Salicornia europaea

  2023cites this paper
• Plant Metabolomics: An Overview of the Role of Primary and Secondary Metabolites against Different Environmental Stress Factors

  2023cites this paper
• SALINITY TOLERANCE IN WHEAT: RESPONSES, MECHANISMS AND ADAPTATION APPROACHES

  2023cites this paper
• Monitoring a metabolic profile of wheat by using FTIR spectroscopy and chemometric methods — concept studies

  2023cites this paper
• Combined analysis of metabolome and transcriptome provides insights into metabolisms of chlorophylls, carotenoids, and flavonoids in the yellowing leaves of ‘HAES344’ macadamia

  2023cites this paper
• In vivo spectroscopy and machine learning for the early detection and classification of different stresses in apple trees

  2023cites this paper
• Microbiomes and metabolomes of dominant coral reef primary producers illustrate a potential role for immunolipids in marine symbioses

  2023cites this paper
• Hormonal regulation of plant primary metabolism under drought.

  2023cites this paper
• Metabolic variations in root tissues and rhizosphere soils of weak host plants potently lead to distinct host status and chemotaxis regulation of Meloidogyne incognita in intercropping

  2023cites this paper
• Plant response to heavy metal stress toxicity: the role of metabolomics and other omics tools.

  2023cites this paper
• Effects of Drought Stress on the Morphological Structure and Flower Organ Physiological Characteristics of Camellia oleifera Flower Buds

  2023cites this paper
• Impact of Foliar Spraying by Using Some Stimulative Substances on Growth, Green Pods, Dry Seed Yield, Its Components and Some Chemical Constituents of Pea Plants (Pisum sativum L.) under High Temperature Stress Conditions

  2023cites this paper
• A Review of Potato Salt Tolerance

  2023cites this paper
• Genome-Wide Analysis of Glutathione S-Transferase Gene Family in P. vulgaris Under Drought and Salinity Stress

  2023cites this paper
• Pseudomonas spp. can help plants face climate change

  2023cites this paper
• Transcriptomic analysis provides insight into the genetic regulation of shade avoidance in Aegilops tauschii

  2023cites this paper
• Study on Phyllosphere Microbial Community of Nettle Leaf during Different Seasons

  2023cites this paper
• Multi-omics approaches for understanding stressor-induced physiological changes in plants: An updated overview

  2023cites this paper
• Widely untargeted metabolomic profiling unearths metabolites and pathways involved in leaf senescence and N remobilization in spring-cultivated wheat under different N regimes

  2023cites this paper
• Fungicide-free management of Alternaria leaf blotch and fruit spot on apple indicates Alternaria spp. as secondary colonizer

  2023cites this paper
• Integrated analysis of transcriptome, metabolome, and histochemistry reveals the response mechanisms of different ages Panax notoginseng to root-knot nematode infection

  2023cites this paper
• Analysis of metabolic differences in maize in different growth stages under nitrogen stress based on UPLC-QTOF-MS

  2023cites this paper
• Pretreatment with salicylic acid and nitric oxide mitigated silver nanoparticles toxicity and enhanced their removal in medicinal Phlomis tuberosa plants

  2023cites this paper
• Plant geographic distribution influences chemical defenses in native and introduced Plantago lanceolata populations

  2023cites this paper
• Comparative Primary Metabolite Profiling of Setaria viridis Reveals Potential Markers to Water Limitation

  2023cites this paper
• Comparative metabolomic profiling of Arabidopsis thaliana roots and leaves reveals complex response mechanisms induced by a seaweed extract

  2023cites this paper
• Brewer’s Spent Grain, Coffee Grounds, Burdock, and Willow–Four Examples of Biowaste and Biomass Valorization through Advanced Green Extraction Technologies

  2023cites this paper
• Potential pathways and genes expressed in Chrysanthemum in response to early fusarium oxysporum infection

  2023cites this paper
• Developing an in vitro elicitation strategy for specialized secondary metabolites production in adventitious root cultures of Primula veris subsp. veris

  2023cites this paper
• In Vitro Effect of Mannitol Stress and γ-ray on Secondary Products From Golden Sunrise Cherry Tomato Callus

  2023cites this paper
• Effects of Heavy Metals on the Metabolome of Pinus sylvestris (Pinaceae)

  2022cites this paper
• Stress-Induced Intensification of Deoxyshikonin Production in Rindera graeca Hairy Root Cultures with Ester-Based Scaffolds

  2022cites this paper
• Continuous monitoring of chemical signals in plants under stress

  2022cites this paper
• Ethylene treatment promotes umami taste-active amino acids accumulation of Torreya grandis nuts post-harvest by comparative chemical and transcript analyses.

  2022cites this paper
• The content of metabolites in soybeans roots after inoculation seeds of Bradyrhizobium japonicum and treatment with fungicide preparations

  2022cites this paper