A spectroscopic study on the interactions of porphyrin with G-quadruplex DNAs.

No abstract is available for this paper.

• Publication year

  2006

• Venue

  Biochemistry

• Publication date

  2006-05-30

• Fields of study

  Medicine, Chemistry

• Identifiers
  DOI 10.1021/BI052356ZPMID 16716079
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

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  1983cited by this paper
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