Transition of chromatin status during the process of recovery from drought stress in Arabidopsis thaliana.

No abstract is available for this paper.

• Publication year

  2012

• Venue

  Plant and Cell Physiology

• Publication date

  2012-05-01

• Fields of study

  Biology, Medicine, Environmental Science

• Identifiers
  DOI 10.1093/pcp/pcs053PMID 22505693
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Highly reproducible ChIP-on-chip analysis to identify genome-wide protein binding and chromatin status in Arabidopsis thaliana.

  2014cited by this paper
• Arabidopsis HDA6 is required for freezing tolerance.

  2011cited by this paper
• Arabidopsis HDA6 Regulates Locus-Directed Heterochromatin Silencing in Cooperation with MET1

  2011cited by this paper
• The Arabidopsis RING E3 Ubiquitin Ligase AtAIRP2 Plays Combinatory Roles with AtAIRP1 in Abscisic Acid-Mediated Drought Stress Responses1[C][W][OA]

  2011cited by this paper
• Rapid and Reversible Light-Mediated Chromatin Modifications of Arabidopsis Phytochrome A Locus[C][W]

  2011cited by this paper
• An siRNA pathway prevents transgenerational retrotransposition in plants subjected to stress

  2011cited by this paper
• Chromatin regulation functions in plant abiotic stress responses.

  2010cited by this paper
• The Arabidopsis Paf1c Complex Component CDC73 Participates in the Modification of FLOWERING LOCUS C Chromatin1[C][W][OA]

  2010cited by this paper
• Genome-wide profiling of histone H3 lysine 9 acetylation and dimethylation in Arabidopsis reveals correlation between multiple histone marks and gene expression

  2010influential reference
• Reading, writing and editing methylated lysines on histone tails: new insights from recent structural studies.

  2010cited by this paper
• Dynamic changes in genome-wide histone H3 lysine 4 methylation patterns in response to dehydration stress in Arabidopsis thaliana

  2010cited by this paper
• The nucleotidase/phosphatase SAL1 is a negative regulator of drought tolerance in Arabidopsis.

  2009cited by this paper
• Dynamic Landscapes of Four Histone Modifications during Deetiolation in Arabidopsis[W]

  2009cited by this paper
• Histone occupancy-dependent and -independent removal of H3K27 trimethylation at cold-responsive genes in Arabidopsis.

  2009cited by this paper
• Genome-wide analysis of mono-, di- and trimethylation of histone H3 lysine 4 in Arabidopsis thaliana

  2009cited by this paper
• Control of the transition to flowering by chromatin modifications.

  2009cited by this paper
• Lysine acetylation: codified crosstalk with other posttranslational modifications.

  2008cited by this paper
• Developmentally regulated transcription of mammalian telomeres by DNA-dependent RNA polymerase II

  2008cited by this paper
• Rapid, transcription-independent loss of nucleosomes over a large chromatin domain at Hsp70 loci.

  2008cited by this paper
• Up-regulation of stress-inducible genes in tobacco and Arabidopsis cells in response to abiotic stresses and ABA treatment correlates with dynamic changes in histone H3 and H4 modifcations

  2008cited by this paper
• The organization of histone H3 modifications as revealed by a panel of specific monoclonal antibodies.

  2008cited by this paper
• Analyzing real-time PCR data by the comparative CT method

  2008cited by this paper
• Histone Modifications and Nuclear Architecture: A Review

  2008cited by this paper
• Alterations of lysine modifications on the histone H3 N-tail under drought stress conditions in Arabidopsis thaliana.

  2008influential reference
• Chromatin modifications and their function.

  2007cited by this paper
• Covalent modifications of histones during development and disease pathogenesis

  2007cited by this paper
• Histone modifications and dynamic regulation of genome accessibility in plants.

  2007cited by this paper
• Up-regulation of stress-inducible genes in tobacco and Arabidopsis cells in response to abiotic stresses and ABA treatment correlates with dynamic changes in histone H3 and H4 modifications

  2007cited by this paper
• Organismal Differences in Post-translational Modifications in Histones H3 and H4*

  2007cited by this paper
• Transgeneration memory of stress in plants

  2006cited by this paper
• Histone modifications: signalling receptors and potential elements of a heritable epigenetic code.

  2006cited by this paper
• Organization of cis-acting regulatory elements in osmotic- and cold-stress-responsive promoters.

  2005cited by this paper
• Methylation patterns of histone H3 Lys 4, Lys 9 and Lys 27 in transcriptionally active and inactive Arabidopsis genes and in atx1 mutants

  2005cited by this paper
• PAF1-complex-mediated histone methylation of FLOWERING LOCUS C chromatin is required for the vernalization-responsive, winter-annual habit in Arabidopsis.

  2004cited by this paper
• Characterization of the expression of a desiccation-responsive rd29 gene of Arabidopsis thaliana and analysis of its promoter in transgenic plants

  2004cited by this paper
• FACT Facilitates Transcription-Dependent Nucleosome Alteration

  2003cited by this paper
• Histone acetylation and deacetylation in yeast

  2003cited by this paper
• Monitoring expression profiles of Arabidopsis gene expression during rehydration process after dehydration using ca 7000 full-length cDNA microarray.

  2003cited by this paper
• Functional Annotation of a Full-Length Arabidopsis cDNA Collection

  2002cited by this paper
• Active genes are tri-methylated at K4 of histone H3

  2002cited by this paper
• Important roles of drought- and cold-inducible genes for galactinol synthase in stress tolerance in Arabidopsis thaliana.

  2002influential reference
• Dynamics of global histone acetylation and deacetylation in vivo: rapid restoration of normal histone acetylation status upon removal of activators and repressors.

  2002cited by this paper
• Translating the Histone Code

  2001cited by this paper
• Highly specific antibodies determine histone acetylation site usage in yeast heterochromatin and euchromatin.

  2001cited by this paper
• Calibration of the Lutetium-Hafnium Clock

  2001cited by this paper
• Global histone acetylation and deacetylation in yeast

  2000cited by this paper
• An Arabidopsis gene encoding a Ca2+-binding protein is induced by abscisic acid during dehydration.

  2000cited by this paper
• FLOWERING LOCUS C Encodes a Novel MADS Domain Protein That Acts as a Repressor of Flowering

  1999cited by this paper
• Chromosomal landscape of nucleosome-dependent gene expression and silencing in yeast

  1999cited by this paper
• A nuclear gene encoding mitochondrial proline dehydrogenase, an enzyme involved in proline metabolism, is upregulated by proline but downregulated by dehydration in Arabidopsis.

  1996influential reference
• A novel cis-acting element in an Arabidopsis gene is involved in responsiveness to drought, low-temperature, or high-salt stress.

  1994cited by this paper
• Formation of nucleosomes on positively supercoiled DNA.

  1991cited by this paper
• Nucleosome loss activates yeast downstream promoters in vivo.

  1988cited by this paper
• Chromatin Modifications and Their Function

  year unknowncited by this paper

• Advancing crop resilience to environmental stresses: Insights from epigenetic modification and CRISPR/dCas9-based editing.

  2026cites this paper
• CUT&tag analysis reveals a crucial role of H3K4 trimethylation occupancy in cold-related genes by cold stress on cotton.

  2026cites this paper
• RrMYB2 Regulates Drought Stress via RrJMJ12‐Dependent Epigenetic Modification in Rosa rugosa

  2025cites this paper
• Functions and Mechanisms of Histone Modifications in Plants.

  2025cites this paper
• H3K4 demethylase SsJMJ11 negatively regulates drought-tolerance responses in sugarcane

  2025cites this paper
• Phylogenomic analysis of bromodomain genes in cotton (Gossypium spp.) and their potential roles in abiotic stress tolerance

  2025cites this paper
• Stabilization of the MAPK–Epigenetic Signaling Axis Underlies the Protective Effect of Thyme Oil Against Cadmium Stress in Root Meristem Cells of Vicia faba

  2025cites this paper
• Epigenetics in the modern era of crop improvements

  2025cites this paper
• H3K4me3 binding ALFIN-LIKE proteins recruit SWR1 for gene-body deposition of H2A.Z

  2025cites this paper
• Heritable Epigenetic Changes in Plant Stress Responses: Implications for Crop Resilience

  2025cites this paper
• Epigenetic Mechanisms Driving Adaptation in Tropical and Subtropical Plants: Insights and Future Directions

  2025cites this paper
• Histone Methylation in Plant Responses to Abiotic Stresses.

  2025cites this paper
• Integrating Physiological, Molecular, and Epigenetic Strategies for Drought–resilient Crops

  2025cites this paper
• Genotype-specific transcriptomic response to drought stress in potato cultivars modulated by microbial biostimulants

  2025cites this paper
• An integrative multi‐omics analysis of histone modifications and DNA methylation reveals the epigenomic landscape in apple under drought stress

  2025cites this paper
• Exploring physiological and molecular dynamics of drought stress responses in plants: challenges and future directions

  2025cites this paper
• The H3K4me3 binding ALFIN-LIKE proteins recruit SWR1 for gene-body deposition of H2A.Z

  2024cites this paper
• The role of Stress Memory in the Adaptation of Plants to Drought Stress Conditions: Molecular Approaches and Perspectives

  2024cites this paper
• Biochemical and Transcriptomic Analyses Reveal Key Salinity and Alkalinity Stress Response and Tolerance Pathways in Salix linearistipularis Inoculated with Trichoderma

  2024cites this paper
• Transcriptional patterns and histone modification signatures reveal dehydration memory behaviour in seedlings of Gossypium hirsutum

  2024cites this paper
• Epigenetic control of plant abiotic stress responses.

  2024cites this paper
• Effect of Epigenomics on different stresses of Horticultural crops

  2024cites this paper
• Advanced Biotechnological Interventions in Mitigating Drought Stress in Plants

  2024cites this paper
• Division Zone Activity Determines the Potential of Drought-Stressed Maize Leaves to Resume Growth after Rehydration.

  2024cites this paper
• Epigenetic Modifications in Genome Help Remembering the Stress Tolerance Strategy Adopted by the Plant.

  2024cites this paper
• The Mediator kinase module enhances polymerase activity to regulate transcriptional memory after heat stress in Arabidopsis

  2024cites this paper
• A Multi-Omics Analysis Revealed the Diversity of the MYB Transcription Factor Family’s Evolution and Drought Resistance Pathways

  2024cites this paper
• Regulation of reactive oxygen molecules in pakchoi by histone acetylation modifications under Cd stress

  2024cites this paper
• The pattern of alternative splicing and DNA methylation alteration and their interaction in linseed (Linum usitatissimum L.) response to repeated drought stresses

  2023cites this paper
• OsWR2 recruits OsHDA704 to regulate the deacetylation of H4K8ac in the promoter of OsABI5 in response to drought stress.

  2023cites this paper
• Echoes of a Stressful Past: Abiotic Stress Memory in Crop Plants towards Enhanced Adaptation

  2023cites this paper
• Multi-omic dissection of ancestral heat stress memory responses in Brachypodium distachyon

  2023cites this paper
• Enhancing crop resilience: Understanding the role of drought priming in wheat stress response

  2023cites this paper
• Simple and universal function of acetic acid to overcome the drought crisis

  2023cites this paper
• Microbe-induced plant drought tolerance by ABA-mediated root morphogenesis and epigenetic reprogramming of gene expression

  2023cites this paper
• Stress memory and its regulation in plants experiencing recurrent drought conditions

  2023cites this paper
• Drought-Stress-Related Reprogramming of Gene Expression in Barley Involves Differential Histone Modifications at ABA-Related Genes

  2023cites this paper
• Analysis of lysine acetylation in tomato spot wilt virus infection in Nicotiana benthamiana

  2023cites this paper
• Biochemical and Epigenetic Modulations under Drought: Remembering the Stress Tolerance Mechanism in Rice

  2023cites this paper
• Physiological and transcriptional analyses reveal formation of memory under recurring drought stresses in seedlings of cotton (Gossypium hirsutum).

  2023cites this paper
• A COMPASS histone H3K4 trimethyltransferase pentamer transactivates drought tolerance and growth/biomass production in Populus trichocarpa.

  2023cites this paper
• Changes induced by multi-stage water stress on maize growth, water and nitrogen utilization and hormone signaling under different nitrogen supplies

  2023cites this paper
• The BEL1-like transcription factor GhBLH5-A05 participates in cotton response to drought stress

  2023cites this paper
• Transcriptional and Metabolic Profiling of Arabidopsis thaliana Transgenic Plants Expressing Histone Acetyltransferase HAC1 upon the Application of Abiotic Stress—Salt and Low Temperature

  2023cites this paper
• Reprogramming rice leaves: another layer of senescence regulation

  2023cites this paper
• Microbe‐induced drought tolerance by ABA‐mediated root architecture and epigenetic reprogramming

  2023cites this paper
• Beyond heat waves: Unlocking epigenetic heat stress memory in Arabidopsis.

  2023cites this paper
• SiHDA9 interacts with SiHAT3.1 and SiHDA19 to repress dehydration responses through H3K9 deacetylation in foxtail millet

  2023cites this paper
• Understanding plant stress memory traits can provide a way for sustainable agriculture.

  2023cites this paper
• Genomic and epigenomic determinants of heat stress-induced transcriptional memory in Arabidopsis

  2023cites this paper
• Understanding plant stress memory response for abiotic stress resilience: Molecular insights and prospects.

  2022cites this paper
• Heat Stress-Mediated Constraints in Maize (Zea mays) Production: Challenges and Solutions

  2022cites this paper
• Stress memory responses and seed priming correlate with drought tolerance in plants: an overview

  2022influential citation
• Epigenetic Mechanisms of Senescence in Plants

  2022cites this paper
• Chromatin-Based Transcriptional Reprogramming in Plants under Abiotic Stresses

  2022cites this paper
• An Epigenetic Alphabet of Crop Adaptation to Climate Change

  2022cites this paper
• Epigenetic variation: A major player in facilitating plant fitness under changing environmental conditions

  2022cites this paper
• Histone deacetylase gene SlHDA3 is involved in drought and salt response in tomato

  2022cites this paper
• Transcriptome analysis of trembling aspen (Populus tremuloides) under nickel stress

  2022cites this paper
• Dynamic regulation of DNA methylation and histone modifications in response to abiotic stresses in plants.

  2022cites this paper
• Involvement of JMJ15 in the dynamic change of genome-wide H3K4me3 in response to salt stress

  2022cites this paper
• Transcriptional Stress Memory and Transgenerational Inheritance of Drought Tolerance in Plants

  2022cites this paper
• Molecular and epigenetic basis of heat stress responses and acclimatization in plants

  2022cites this paper
• Reprogramming rice leaves: another layer of senescence regulation

  2022cites this paper
• MYB44-ENAP1/2 restricts HDT4 to regulate drought tolerance in Arabidopsis

  2022cites this paper
• Role of Epigenetics in Modulating Phenotypic Plasticity against Abiotic Stresses in Plants

  2022cites this paper
• Epigenetic variation as a new plant breeding tool: A review

  2022cites this paper
• Plant hormone-mediated stress regulation responses in fruit crops- a review

  2022cites this paper
• Genome-wide H3K9 Acetylation Level Increases with Age-Dependent Senescence of Flag Leaf in Rice (Oryza sativa)

  2021cites this paper
• Heteromeric HSFA2/HSFA3 complexes drive transcriptional memory after heat stress in Arabidopsis

  2021cites this paper
• Dynamics of DNA Methylation and Its Functions in Plant Growth and Development

  2021cites this paper
• Ectopic Overexpression of Histone H3K4 Methyltransferase CsSDG36 from Tea Plant Decreases Hyperosmotic Stress Tolerance in Arabidopsis thaliana

  2021cites this paper
• Physiological and Molecular Biology of High Temperature Stress in Plants

  2021cites this paper
• JMJ27-mediated histone H3K9 demethylation positively regulates drought-stress responses in Arabidopsis.

  2021cites this paper
• DNA methylation and histone modifications induced by abiotic stressors in plants

  2021cites this paper
• Genome-wide analysis of SET-domain group histone methyltransferases in apple reveals their role in development and stress responses

  2021cites this paper
• Histone Acetylation Changes in Plant Response to Drought Stress

  2021cites this paper
• Ten Ways That Weed Evolution Defies Human Management Efforts Amidst a Changing Climate

  2021cites this paper
• Abiotic Stress in Plants; Stress Perception to Molecular Response and Role of Biotechnological Tools in Stress Resistance

  2021cites this paper
• Plants’ Epigenetic Mechanisms and Abiotic Stress

  2021cites this paper
• Systematic analysis of JmjC gene family and stress-response expression of KDM5 subfamily genes in Brassica napus

  2021influential citation
• Horticultural crops tackling stresses: genetic and epigenetic alterations

  2021cites this paper
• Coping with low moisture stress: remembering and responding.

  2021cites this paper
• Multifaceted Chromatin Structure and Transcription Changes in Plant Stress Response

  2021cites this paper
• PSDX: A Comprehensive Multi-Omics Association Database of Populus trichocarpa With a Focus on the Secondary Growth in Response to Stresses

  2021cites this paper
• Metabolic control of histone demethylase activity involved in plant response to high temperature.

  2021cites this paper
• Seed priming of plants aiding in drought stress tolerance and faster recovery: a review

  2021cites this paper
• Horticultural crops tackling stresses: genetic and epigenetic alterations

  2021cites this paper
• Rapid Evolution of Invasive Weeds Under Climate Change: Present Evidence and Future Research Needs

  2021cites this paper
• Delineating the epigenetic regulation of heat and drought response in plants

  2021cites this paper
• Rapid dehydration induces long-term water deficit memory in sorghum seedlings: advantages and consequences

  2020cites this paper
• Epigenetic Control of Plant Response to Heavy Metal Stress: A New View on Aluminum Tolerance

  2020cites this paper
• Epigenetics and epigenomics: underlying mechanisms, relevance, and implications in crop improvement

  2020cites this paper
• Model organisms and their application in environmental epigenetics

  2020cites this paper
• Lipids Of Flowers: Better Way To Keep Flower Fresh Forever

  2020cites this paper
• De novo genome assembly and transcriptome analysis for the drought and salt resistant Solanum sitiens

  2020cites this paper
• Genetic engineering approaches to understanding drought tolerance in plants

  2020cites this paper
• Plant Epigenetic Stress Memory Induced by Drought: A Physiological and Molecular Perspective.

  2020cites this paper
• The function of histone lysine methylation related SET domain group proteins in plants

  2020cites this paper
• Rice lectin protein Osr40c1 imparts drought tolerance by modulating OsSAM2, OsSAP8 and chromatin-associated proteins

  2020cites this paper