A DNA mini‐barcode for land plants

No abstract is available for this paper.

• Publication year

  2014

• Venue

  Molecular Ecology Resources

• Publication date

  2014-05-01

• Fields of study

  Biology, Medicine, Environmental Science

• Identifiers
  DOI 10.1111/1755-0998.12194PMID 24286499
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• The proof and measurement of association between two things.

  2015cited by this paper
• R: A language and environment for statistical computing.

  2014cited by this paper
• DNA barcoding in a biodiversity hot spot: potential value for the identification of Malagasy Euphorbia L. listed in CITES Appendices I and II

  2013cited by this paper
• Tracing transgenic maize as affected by breadmaking process and raw material for the production of a traditional maize bread, broa.

  2013cited by this paper
• How to Open the Treasure Chest? Optimising DNA Extraction from Herbarium Specimens

  2012cited by this paper
• Utility of the trnH–psbA Intergenic Spacer Region and Its Combinations as Plant DNA Barcodes: A Meta-Analysis

  2012cited by this paper
• Choosing and Using a Plant DNA Barcode

  2011cited by this paper
• DNA Damage in Plant Herbarium Tissue

  2011cited by this paper
• DNA Barcode Sequence Identification Incorporating Taxonomic Hierarchy and within Taxon Variability

  2011cited by this paper
• Hemp in ancient rope and fabric from the Christmas Cave in Israel: talmudic background and DNA sequence identification

  2011cited by this paper
• APG III: Bibliographical Information and Synonymy of Magnoliidae

  2011cited by this paper
• A new classification and linear sequence of extant gymnosperms

  2011cited by this paper
• DNA barcoding: a new tool for palm taxonomists?

  2011cited by this paper
• A linear sequence of extant families and genera of lycophytes and ferns

  2011cited by this paper
• Effect of Thermal Treatment on the Amplification and Quantification of Transgenic and Non-transgenic Soybean and Maize DNA

  2010cited by this paper
• A unified index of sequence quality and contig overlap for DNA barcoding

  2010cited by this paper
• TranslatorX: multiple alignment of nucleotide sequences guided by amino acid translations

  2010influential reference
• Monitoring genetically modified soybean along the industrial soybean oil extraction and refining processes by polymerase chain reaction techniques

  2010cited by this paper
• Soft Fruit Traceability in Food Matrices using Real-Time PCR

  2009cited by this paper
• PHYLOGENY AND CLASSIFICATION OF THE MARCHANTIOPHYTA

  2009cited by this paper
• A DNA barcode for land plants

  2009cited by this paper
• A universal DNA mini-barcode for biodiversity analysis

  2008cited by this paper
• PCR detection of soy ingredients in bread

  2008cited by this paper
• Multiple Multilocus DNA Barcodes from the Plastid Genome Discriminate Plant Species Equally Well

  2008cited by this paper
• Use of quantitative real-time PCR to estimate maize endogenous DNA degradation after cooking and extrusion or in food products.

  2007cited by this paper
• Enhancements and modifications of primer design program Primer3

  2007influential reference
• A Two-Locus Global DNA Barcode for Land Plants: The Coding rbcL Gene Complements the Non-Coding trnH-psbA Spacer Region

  2007cited by this paper
• Progress and challenges toward developing a phylogeny and classification of the hornworts

  2007cited by this paper
• Ethylene-induced stomatal closure in Arabidopsis occurs via AtrbohF-mediated hydrogen peroxide synthesis.

  2006cited by this paper
• Kalign – an accurate and fast multiple sequence alignment algorithm

  2005influential reference
• Degradation of endogenous and exogenous genes of roundup-ready soybean during food processing.

  2005cited by this paper
• MUSCLE: multiple sequence alignment with high accuracy and high throughput.

  2004influential reference
• Sodium boric acid: a Tris-free, cooler conductive medium for DNA electrophoresis.

  2004influential reference
• PCR Amplification of Wheat Sequences from DNA Extracted During Milling and Baking

  2004cited by this paper
• Fate of genetically modified maize DNA in the oral cavity and rumen of sheep

  2003cited by this paper
• Family-level relationships of Onagraceae based on chloroplast rbcL and ndhF data.

  2003cited by this paper
• Real Time PCR for the detection and discrimination of cereal contamination in gluten free foods

  2003cited by this paper
• The effect of processing parameters on DNA degradation in food

  2003influential reference
• Discrimination of primer 3'-nucleotide mismatch by taq DNA polymerase during polymerase chain reaction.

  2000cited by this paper
• A molecular analysis of ground sloth diet through the last glaciation

  2000cited by this paper
• Limits of a PCR-based detection method for genetically modified soya beans in wheat bread production

  1999cited by this paper
• Digital PCR.

  1999cited by this paper
• Determination of DNA traces in rapeseed oil

  1998cited by this paper
• Detection of the genetic modification in heat-treated products of Bt maize by polymerase chain reaction

  1998cited by this paper
• Consensus-degenerate hybrid oligonucleotide primers for amplification of distantly related sequences.

  1998cited by this paper
• A PCR-based Method for the Detection of Hexaploid Bread Wheat Adulteration of Durum Wheat and Pasta

  1998cited by this paper
• Molecular coproscopy: dung and diet of the extinct ground sloth Nothrotheriops shastensis.

  1998cited by this paper
• Sequence mapping by electronic PCR

  1997influential reference
• SEAVIEW and PHYLO_WIN: two graphic tools for sequence alignment and molecular phylogeny

  1996influential reference
• Controlling the false discovery rate: a practical and powerful approach to multiple testing

  1995cited by this paper
• Extension of base mispairs by Taq DNA polymerase: implications for single nucleotide discrimination in PCR.

  1992cited by this paper
• Fast text searching: allowing errors

  1992influential reference
• Short PCR product yields improved by lower denaturation temperatures.

  1991influential reference
• Effects of primer-template mismatches on the polymerase chain reaction: human immunodeficiency virus type 1 model studies.

  1990cited by this paper
• Basic local alignment search tool.

  1990influential reference
• Characterization of polymerase chain reaction amplification of specific alleles.

  1990cited by this paper
• Minimal homology requirements for PCR primers.

  1989cited by this paper
• DNA sequencing with chain-terminating inhibitors.

  1977cited by this paper
• A METHOD FOR JUDGING ALL CONTRASTS IN THE ANALYSIS OF VARIANCE

  1953cited by this paper
• Note on the sampling error of the difference between correlated proportions or percentages

  1947cited by this paper
• Probable Inference, the Law of Succession, and Statistical Inference

  1927influential reference

• Inferring Tripartite Associations of Vector-Borne Plant Pathogens Using a Next-Generation Sequencing Approach

  2025cites this paper
• A phylogenetically informed generic reclassification of the hemionitid ferns (Pteridaceae: Cheilanthoideae)

  2025cites this paper
• Identification of potential insect ecological interactions using a metabarcoding approach

  2025cites this paper
• Accelerating Moss Identification Through the Development of Specific DNA Barcodes Based on the Whole Chloroplast Genome

  2025cites this paper
• DNA metabarcoding reveals greater plant diversity than morphological seed analysis of bird feces

  2025cites this paper
• A comprehensive assessment of non-indigenous species requires the combination of multi-marker eDNA metabarcoding with classical taxonomic identification.

  2025cites this paper
• Molecular Study of the Two Species of senna L. in Iraq

  2025cites this paper
• AI for difficult herbarium specimens: identification of peat mosses (subgenus Sphagnum) without dissection.

  2025cites this paper
• Authenticity in bakery products: Detection of pistachio fraud using NGS metabarcoding

  2025cites this paper
• Building a reliable 16S mini-barcode library of wild bees from Occitania, south-west of France

  2025cites this paper
• Development of a mitochondrial mini-barcode and its application in metabarcoding for identification of leech in traditional Chinese medicine

  2025cites this paper
• CSI botany: DNA barcode fingerprints verify identities of aquatic plants in Van Cortlandt Park, New York

  2024cites this paper
• Morphological and molecular tracing of two ornamental vampire crabs (Decapoda: Sesarmidae) from Central Java

  2024cites this paper
• Welcome to Hotel Hymenoptera: monitoring cavity-nesting bee and wasp distribution and their trophic interactions using community science and metabarcoding

  2024cites this paper
• DNA Barcoding and Metabarcoding Protocols for Species Identification.

  2024cites this paper
• Comprehensive analysis using DNA metabarcoding, SCAR marker based PCR assay, and HPLC unveils the adulteration in Brahmi herbal products

  2023cites this paper
• Peran Mini-Barcode Internal Transcribed Spacer 2 (ITS2) untuk Identifikasi Molekuler Spesies Anggrek

  2023cites this paper
• The matK Mini-barcode as a Potential Molecular Identification Tool for Medicinal Orchids

  2023cites this paper
• Horizon scan of DNA-based methods for quality control and monitoring of herbal preparations

  2023cites this paper
• Environmental DNA as an emerging tool in botanical research.

  2023cites this paper
• Development of nucleotide signatures for common poisonous organisms provides a new strategy for food poisoning diagnosis.

  2023cites this paper
• DNA barcoding coupled with high resolution melting (BAR-HRM) analysis for differentiation white kwao khruea (pueraria candollei), black kwao khruea (mucuna macrocarpa), and red kwao khruea (butea superba)

  2023cites this paper
• Qualitative identification of lonicerae japonicae flos in traditional chinese medicine using metabarcoding combined with specific mini-barcodes

  2023cites this paper
• Virus Yellows and Syndrome “Basses Richesses” in Western Switzerland: A Dramatic 2020 Season Calls for Urgent Control Measures

  2022cites this paper
• Andrographis Echioides Molecular Characterization and Phylogenetic Study Using DNA Barcoding Technique

  2022cites this paper
• Challenges in Medicinal and Aromatic Plants DNA Barcoding—Lessons from the Lamiaceae

  2022cites this paper
• Do taxon-specific DNA barcodes improve species discrimination relative to universal barcodes in Lauraceae?

  2022cites this paper
• Diet preferences based on sequence read count: The role of species interaction in tissue bias correction

  2022cites this paper
• A dPCR Method for Quantitative Authentication of Wild Lingonberry (Vaccinium vitis-idaea) versus Cultivated American Cranberry (V. macrocarpon)

  2022cites this paper
• Environmental DNA analysis as an emerging non-destructive method for plant biodiversity monitoring: a review

  2022cites this paper
• Differences by origin in methylome suggest eco‐phenotypes in the kelp Saccharina latissima

  2022cites this paper
• Identification of Lagopus muta japonica food plant resources in the Northern Japan Alps using DNA metabarcoding

  2022cites this paper
• Detection of Adulteration and Pesticide Residues in Chinese Patent Medicine Qipi Pill Using KASP Technology and GC-MS/MS

  2022cites this paper
• Double trouble: untangling mixed sequence signals in bird samples with avian haemosporidian co-infections

  2022cites this paper
• Application of DNA Barcoding for authentication of Balinese traditional medicinal plant Purnajiwa (Kopsia arborea Blume. and Euchresta horsfieldii) (Lesch.) Benn

  2022cites this paper
• Using DNA Metabarcoding to Identify Floral Visitation by Pollinators

  2022cites this paper
• DNA barcoding: an efficient technology to authenticate plant species of traditional Chinese medicine and recent advances

  2022cites this paper
• Seagrass ( Halophila stipulacea ) invasion enhances carbon sequestration in the Mediterranean

  2021cites this paper
• Towards the extended barcode concept: Generating DNA reference data through genome skimming of danish plants

  2021cites this paper
• DNA‐RNA Barcoding and Gene Sequencing

  2021cites this paper
• Identifying cryptic fern gametophytes using DNA barcoding: A review

  2021cites this paper
• Geographic source estimation using airborne plant environmental DNA in dust

  2021cites this paper
• Faecal metabarcoding reveals pervasive long-distance impacts of garden bird feeding

  2021cites this paper
• Authentication of Hedyotis products by adaptor ligation-mediated PCR and metabarcoding.

  2021cites this paper
• Integrated biological and chemical characterisation of a pair of leonardesque canal lock gates

  2021cites this paper
• Lake Sedimentary DNA Research on Past Terrestrial and Aquatic Biodiversity: Overview and Recommendations

  2021cites this paper
• Seagrass (Halophila stipulacea) invasion enhances carbon sequestration in the Mediterranean Sea

  2021cites this paper
• Estimation of Geographic Origin from Dust Using Plant DNA Metabarcoding

  2021cites this paper
• Authentication of berries and berry-based food products.

  2021cites this paper
• Genome skimming and exploration of DNA barcodes for Taiwan endemic cypresses

  2020cites this paper
• Development of a Specific Mini-Barcode From Plastome and its Application for Qualitative and Quantitative Identification of Processed Herbal Products Using DNA Metabarcoding Technique: A Case Study on Senna

  2020cites this paper
• Pollen availability for the Horned mason bee (Osmia cornuta) in regions of different land use and landscape structures

  2020cites this paper
• The complete chloroplast genome of Gleditsia sinensis and Gleditsia japonica: genome organization, comparative analysis, and development of taxon specific DNA mini-barcodes

  2020cites this paper
• A DNA mini‐barcode for marine macrophytes

  2020cites this paper
• Botanical origin authentication of dietary supplements by DNA-based approaches.

  2020cites this paper
• Paleo‐metagenomics of North American fossil packrat middens: Past biodiversity revealed by ancient DNA

  2020cites this paper
• Method for the Identification of Plant DNA in Food Using Alignment-Free Analysis of Sequencing Reads: A Case Study on Lupin

  2020cites this paper
• Characteristics and Mutational Hotspots of Plastomes in Debregeasia (Urticaceae)

  2020cites this paper
• Pitfalls and promises of raw drug identification techniques in the ayurvedic industry: an overview

  2020cites this paper
• Plant DNA Barcodes

  2019cites this paper
• Application of next-generation sequencing for the identification of herbal products.

  2019cites this paper
• Evaluation of the variables altitude, soil composition and development of a predictive model of the antibacterial activity for the genus Hypericum by chromatographic fingerprint

  2019cites this paper
• Assessment of seasonal variation of diet composition in rodents using DNA barcoding and Real-Time PCR

  2019cites this paper
• The underestimated taxa: the role of non-bee pollinators in temperate vegetable crops, experimental research in strawberry (Fragaria spp.) crops

  2019influential citation
• Plant–herbivorous insect networks: who is eating what revealed by long barcodes using high‐throughput sequencing and Trinity assembly

  2019cites this paper
• Mini-barcodes are more suitable for large-scale species discovery in Metazoa than full-length barcodes

  2019cites this paper
• Machine learning approaches outperform distance- and tree-based methods for DNA barcoding of Pterocarpus wood

  2019cites this paper
• Amplicon library protocol for metabarcoding-based diet analysis in blue tits (Cyanistes caeruleus) using faecal DNA v1

  2019cites this paper
• Detecting Schisandrae Chinensis Fructus and Its Chinese Patent Medicines with a Nucleotide Signature

  2019cites this paper
• Single Fragment or Bulk Soil DNA Metabarcoding: Which is Better for Characterizing Biological Taxa Found in Surface Soils for Sample Separation?

  2019cites this paper
• DNA barcoding to trace medicinal and aromatic plants from the field to the food supplement

  2019cites this paper
• Identification of Food Plants in the Diet of Japanese Ptarmigan (Lagopus mutus japonicus) in the Japan's Northern Japan Alps using DNA Barcoding

  2019cites this paper
• Taxonomic principles, reproductive systems, population genetics and relationships within selected groups of genus Taraxacum (Asteraceae)

  2018cites this paper
• A protocol for obtaining DNA barcodes from plant and insect fragments isolated from forensic-type soils

  2018cites this paper
• DNA barcoding in concentrated Chinese medicine granules using adaptor ligation‐mediated polymerase chain reaction

  2018cites this paper
• DNA-based techniques for authentication of processed food and food supplements.

  2018cites this paper
• Authentication of Small Berry Fruit in Fruit Products by DNA Barcoding Method.

  2018cites this paper
• New universal ITS2 primers for high-resolution herbivory analyses using DNA metabarcoding in both tropical and temperate zones

  2018cites this paper
• Environmental DNA (eDNA): A Promising Biological Survey Tool for Aquatic Species Detection

  2018cites this paper
• Genetic Diversity of Large Japanese Field Mouse Apodemus speciosus Populations and Identification of their Food Plant Resources using DNA Barcoding in an Industrial Green Space

  2018cites this paper
• COI barcode-HRM as a novel approach for the discrimination of hake species

  2018cites this paper
• DNA Barcoding Significance and Utilities

  2018cites this paper
• Next generation DNA sequencing based strategies; towards a new era for the traceability of endangered species and genetically modified organisms

  2018influential citation
• DNA Barcoding in Forensic Botany

  2018cites this paper
• DNA Barcode Authentication and Library Development for the Wood of Six Commercial Pterocarpus Species: the Critical Role of Xylarium Specimens

  2018cites this paper
• Novel quantitative real-time PCR approach to determine safflower (Carthamus tinctorius) adulteration in saffron (Crocus sativus).

  2017cites this paper
• Use of DNA barcoding in the assignment of commercially valuable fish species from Romania

  2017cites this paper
• Conserving the biodiversity of Kuwait through DNA barcoding the flora

  2017cites this paper
• Elucidating the diet of the island flying fox (Pteropus hypomelanus) in Peninsular Malaysia through Illumina Next- Generation Sequencing

  2017cites this paper
• Genetic diversity between native and improved Cattleya walkeriana Gardner famous clones

  2017cites this paper
• DNA barcode regions for differentiating Cattleya walkeriana and C. loddigesii

  2017cites this paper
• Advances of Community-Level Plant DNA Barcoding in China

  2017cites this paper
• Review: DNA Barcoding and Chromatography Fingerprints for the Authentication of Botanicals in Herbal Medicinal Products

  2017cites this paper
• Using eDNA to determine the source of organic carbon in seagrass meadows

  2017cites this paper
• Elucidating the diet of the island flying fox (Pteropus hypomelanus) in Peninsular Malaysia through Illumina Next-Generation Sequencing

  2017cites this paper
• Development and validation of a multi-locus DNA metabarcoding method to identify endangered species in complex samples

  2017cites this paper
• Einsatz von eDNA im Amphibien-Monitoring

  2017cites this paper
• Pollen DNA barcoding: current applications and future prospects.

  2016cites this paper
• Advances in DNA metabarcoding for food and wildlife forensic species identification

  2016cites this paper
• Using the ITS2 sequence-structure as a DNA mini-barcode: A case study in authenticating the traditional medicine“Fang Feng”

  2016cites this paper