Genetic consequences of interbreeding between farmed and wild Atlantic salmon: insights from the transcriptome

No abstract is available for this paper.

• Publication year

  2008

• Venue

  Molecular Ecology

• Publication date

  2008-01-01

• Fields of study

  Biology, Medicine, Environmental Science

• Identifiers
  DOI 10.1111/j.1365-294X.2007.03438.xPMID 18173503
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Heterosis associated gene expression in maize embryos 6 days after fertilization exhibits additive, dominant and overdominant pattern

  2007cited by this paper
• Genome-wide survey of the gene expression response to saprolegniasis in Atlantic salmon.

  2007cited by this paper
• Heterosis: revisiting the magic.

  2007cited by this paper
• Transcriptomic analysis of growth heterosis in larval Pacific oysters (Crassostrea gigas)

  2007influential reference
• Genetic and ecological effects of salmon farming on wild salmon: modelling from experimental results

  2006cited by this paper
• Growth and Behavioral Consequences of Introgression of a Domesticated Aquaculture Genotype into a Native Strain of Coho Salmon

  2006influential reference
• All possible modes of gene action are observed in a global comparison of gene expression in a maize F1 hybrid and its inbred parents.

  2006cited by this paper
• Evidence for a large‐scale population structure among accessions of Arabidopsis thaliana: possible causes and consequences for the distribution of linkage disequilibrium

  2006cited by this paper
• Inheritance Patterns of Transcript Levels in F1 Hybrid Mice

  2006cited by this paper
• Genetic Analysis of Variation in Gene Expression in Arabidopsis thaliana

  2005influential reference
• Rapid parallel evolutionary changes of gene transcription profiles in farmed Atlantic salmon

  2005influential reference
• Fugitive Salmon: Assessing the Risks of Escaped Fish from Net-Pen Aquaculture

  2005cited by this paper
• Fish and chips: Various methodologies demonstrate utility of a 16,006-gene salmonid microarray

  2005cited by this paper
• Improved tagging strategy for protein identification in mammalian cells

  2005cited by this paper
• Nonadditive Gene Expression in Diploid and Triploid Hybrids of Maize

  2005influential reference
• Growth differences among first and second generation hybrids of domesticated and wild rainbow trout (Oncorhynchus mykiss)

  2005cited by this paper
• Extensive Sex-Specific Nonadditivity of Gene Expression in Drosophila melanogaster

  2004influential reference
• Remedies for pseudoreplication

  2004cited by this paper
• Outbreeding Depression in Hybrids Between Spatially Separated Pink Salmon, Oncorhynchus gorbuscha, Populations: Marine Survival, Homing ability, and Variability in Family Size

  2004cited by this paper
• Fitness reduction and potential extinction of wild populations of Atlantic salmon, Salmo salar, as a result of interactions with escaped farm salmon

  2003influential reference
• Data Analysis Tools for DNA Microarrays

  2003cited by this paper
• Effects of domestication on growth physiology and endocrinology of Atlantic salmon (Salmo salar)

  2002cited by this paper
• Genetic Dissection of Transcriptional Regulation in Budding Yeast

  2002cited by this paper
• STATISTICAL ANALYSIS OF A GENE EXPRESSION MICROARRAY EXPERIMENT WITH REPLICATION

  2002cited by this paper
• Egg-size evolution in aquatic environments: does oxygen availability constrain size?

  2002cited by this paper
• Genetic Dissection of Transcriptional Regulation in Budding Yeast

  2002cited by this paper
• A direct approach to false discovery rates

  2002cited by this paper
• Assessing Gene Significance from cDNA Microarray Expression Data via Mixed Models

  2001cited by this paper
• Analysis of Variance for Gene Expression Microarray Data

  2000cited by this paper
• SELECTION AGAINST LATE EMERGENCE AND SMALL OFFSPRING IN ATLANTIC SALMON (SALMO SALAR)

  2000cited by this paper
• Highly fecund mothers sacrifice offspring survival to maximize fitness

  2000cited by this paper
• Lifetime success and interactions of farm salmon invading a native population

  2000cited by this paper
• Outbreeding depression in hybrids between odd- and even-broodyear pink salmon

  1999cited by this paper
• Past, present, and future of genetic improvement in salmon aquaculture

  1997cited by this paper
• Experimental tests of genetic divergence of farmed from wild Atlantic salmon due to domestication

  1997influential reference
• Phenotypic and genetic parameters of body composition traits and flesh colour in Atlantic salmon, Salmo salar L

  1996cited by this paper
• Genetic origin of Norwegian farmed Atlantic salmon

  1991cited by this paper
• Early social status and the development of life-history strategies in Atlantic salmon

  1989cited by this paper
• Pseudoreplication and the Design of Ecological Field Experiments

  1984cited by this paper
• Consistently High Meristic Counts in Natural Hybrids Between Brook Trout and Bull Trout

  1983cited by this paper
• Introgressive Hybridization

  1949influential reference

• Functional and structural cardiac remodelling in farmed Atlantic salmon (Salmo salar)

  2026cites this paper
• Defining the water flow cues for navigation in migrating Atlantic salmon smolts

  2025cites this paper
• Introgression affects Salmo trutta juvenile life‐history traits generations after stocking with non‐native strains

  2024cites this paper
• Genetic adaptation despite high gene flow in a range‐expanding population

  2024cites this paper
• Defence‐relevant gene expression differences in hatchlings among wild Newfoundland and farmed European and North American Atlantic salmon and their hybrids

  2024cites this paper
• A paradoxical bias in knowledge about Norwegian freshwater fishes: research efforts during 1980-2020

  2023cites this paper
• Additive and non-additive epigenetic signatures of natural hybridization between fish species with different mating systems

  2022cites this paper
• Long‐term translocation explains population genetic structure of a recreationally fished iconic species in Japan: Combining current knowledge with reanalysis

  2022cites this paper
• Salinity‐induced transcriptome profiles in marine and freshwater threespine stickleback after an abrupt 6‐hour exposure

  2022cites this paper
• Environment and genotype predict the genomic nature of domestication of salmonids as revealed by gene expression

  2022cites this paper
• Farm Animals Are Long Away from Natural Behavior: Open Questions and Operative Consequences on Animal Welfare

  2021cites this paper
• The effects of long-term translocation on population genetic structure of Ayu in Japan: Management implications for a recreationally fished iconic species

  2021cites this paper
• Development of EST-Molecular Markers from RNA Sequencing for Genetic Management and Identification of Growth Traits in Potato Grouper (Epinephelus tukula)

  2021cites this paper
• Freshwater, Landlocked Grand Lake Strain of Atlantic Salmon (Salmo salar L.) as a Potential Genetic Source of Long Chain Polyunsaturated Fatty Acids Synthesis

  2021cites this paper
• Domestication is associated with differential expression of pikeperch egg proteins involved in metabolism, immune response and protein folding.

  2020cites this paper
• Epistatic regulation of growth in Atlantic salmon revealed: a QTL study performed on the domesticated-wild interface

  2020cites this paper
• Additive and non-additive epigenetic signatures of hybridisation between fish species with different mating systems

  2020cites this paper
• Transcriptomic comparison of communally reared wild, domesticated and hybrid Atlantic salmon fry under stress and control conditions

  2020cites this paper
• Lessons from Japan marine stock enhancement and sea ranching programmes over 100 years

  2020cites this paper
• Comparative transcriptomics reveals domestication-associated features of Atlantic salmon lipid metabolism

  2019cites this paper
• Hybrid gene misregulation in multiple developing tissues within a recent adaptive radiation of Cyprinodon pupfishes

  2019cites this paper
• Governing the salmon farming industry: Comparison between national regulations and the ASC salmon standard

  2019cites this paper
• Rigorous monitoring of a large-scale marine stock enhancement program demonstrates the need for comprehensive management of fisheries and nursery habitat

  2019cites this paper
• Rampant hybrid misexpression in craniofacial tissues within a recent adaptive radiation of Cyprinodon pupfishes

  2018cites this paper
• Long‐term evaluation of fitness and demographic effects of a Chinook Salmon supplementation program

  2018cites this paper
• Environmental problems and regulation in the aquaculture industry. Insights from Norway

  2018cites this paper
• Two centuries of human‐mediated gene flow in northern bobwhites

  2017cites this paper
• Half a century of genetic interaction between farmed and wild Atlantic salmon: Status of knowledge and unanswered questions

  2017influential citation
• Recipient of the 2016 Molecular Ecology Prize: Louis Bernatchez – advancing the conservation of aquatic resources with his contributions on the ecological genomics of adaptation and speciation

  2017cites this paper
• Assessment of a land-locked Atlantic salmon (Salmo salar L.) population as a potential genetic resource with a focus on long-chain polyunsaturated fatty acid biosynthesis.

  2016cites this paper
• Comparing the transcriptomes of embryos from domesticated and wild Atlantic salmon (Salmo salar L.) stocks and examining factors that influence heritability of gene expression

  2016cites this paper
• Genomewide introgressive hybridization patterns in wild Atlantic salmon influenced by inadvertent gene flow from hatchery releases

  2016cites this paper
• Report of the Workshop to address the NASCO request for advice on possible effects of salmonid aquaculture on wild Atlantic salmon populations in the North Atlantic (WKCULEF)

  2016cites this paper
• Assessing early fitness consequences of exotic gene flow in the wild: a field study with Iberian pine relicts

  2016cites this paper
• A single generation of domestication heritably alters the expression of hundreds of genes

  2016cites this paper
• Does density influence relative growth performance of farm, wild and F1 hybrid Atlantic salmon in semi-natural and hatchery common garden conditions?

  2016cites this paper
• Reduced Genetic Variation and Decreased Effective Number of Breeders in Five Year-Classes of Cultured Geoducks (Panopea generosa)

  2015cites this paper
• Are farmed salmon more prone to risk than wild salmon? Susceptibility of juvenile farm, hybrid and wild Atlantic salmon Salmo salar L. to an artificial predator

  2015cites this paper
• Hybridization between Yellowstone Cutthroat Trout and Rainbow Trout Alters the Expression of Muscle Growth-Related Genes and Their Relationships with Growth Patterns

  2015cites this paper
• The potential direct and indirect genetic consequences for native Newfoundland Atlantic Salmon from interbreeding with European-origin farm escapes

  2015cites this paper
• Evaluation of the intra and interspecific variability in the genus Perkinsus. Proteomic analysis of the parasite and its interaction with the host

  2015cites this paper
• Genomic Consequences of Hybridization between Rainbow and Cutthroat Trout

  2015cites this paper
• Wildlife Habitat Conservation

  2015cites this paper
• Transcriptional profiling of two Atlantic salmon strains: implications for reintroduction into Lake Ontario

  2015cites this paper
• Maturation, Spawning, and Fecundity of the Farmed Pacific Geoduck Panopea generosa in Puget Sound, Washington

  2015cites this paper
• FISHY FISH? THE ECONOMIC IMPACTS OF ESCAPED FARMED FISH

  2014cites this paper
• Japanese chum salmon stock enhancement: current perspective and future challenges

  2014cites this paper
• A comparison of gene transcription profiles of domesticated and wild Atlantic salmon (Salmo salar L.) at early life stages, reared under controlled conditions

  2014influential citation
• Typical Little Egrets Egretta garzetta mix with Dimorphic Egrets Egretta dimorpha on open coast in Tanzania

  2014cites this paper
• Comparison of protein expression profiles between three Perkinsus spp., protozoan parasites of molluscs, through 2D electrophoresis and mass spectrometry.

  2014cites this paper
• Distribution spatiale et activité des poissons en milieu lacustre - Impacts des facteurs environnementaux à partir d'une approche multi-échelle. Application à la retenue des Bariousses

  2014cites this paper
• The hydrodynamics of river ecosystems : towards an objective and ecologically relevant classification of mesohabitats

  2014influential citation
• Bases génomiques de la divergence adaptative et de la mortalité en mer chez le saumon atlantique (Salmo salar)

  2014cites this paper
• The relative contribution of drift and selection to transcriptional divergence among Babine Lake tributary populations of juvenile rainbow trout

  2013cites this paper
• Influence of developmental stage and genotype on liver mRNA levels among wild, domesticated, and hybrid rainbow trout (Oncorhynchus mykiss)

  2013cites this paper
• Movements and dispersal of farmed Atlantic salmon following a simulated-escape event

  2013cites this paper
• Growth reaction norms of domesticated, wild and hybrid Atlantic salmon families in response to differing social and physical environments

  2013cites this paper
• The Canadian Wildlife Federation’s Position on Open-pen Finfish Aquaculture

  2013cites this paper
• An ecological–economic model on the effects of interactions between escaped farmed and wild salmon (Salmo salar)

  2013cites this paper
• Oncorhynchus mykiss escaped from commercial freshwater aquaculture pens in Lake Huron, Canada

  2013cites this paper
• Ploidy and family effects on Atlantic salmon (Salmo salar) growth, deformity and harvest quality during a full commercial production cycle

  2013cites this paper
• A Novel Method to Identify Key Factors of the Gene Regulatory Network Behind Salmonids Reproductive Behavior Using Directed Graphical Modeling

  2013cites this paper
• Transcriptional variation among populations of salmon: The ge netic architecture of local adaptation

  2013influential citation
• Genetically Based Effects of Domesticated-Wild Outbreeding in Atlantic Salmon

  2013cites this paper
• Impact de l'hybridation introgressive sur la génomique fonctionnelle de l'omble de fontaine (Salvelinus fontinalis, Mitchill)

  2013influential citation
• Screen for Footprints of Selection during Domestication/Captive Breeding of Atlantic Salmon

  2012cites this paper
• Sex‐biased genetic component distribution among populations: additive genetic and maternal contributions to phenotypic differences among populations of Chinook salmon

  2012cites this paper
• Organizational identities in networks: Sense-giving and sense-taking in the salmon farming industry

  2012cites this paper
• Reproductive interactions between wild and farmed Chinook salmon (Oncorhynchus tshawytscha): Conservation and ecological implications

  2012cites this paper
• Comparative transcriptomics of anadromous and resident brook charr Salvelinus fontinalis before their first salt water transition

  2012influential citation
• Stocking impacts the expression of candidate genes and physiological condition in introgressed brook charr (Salvelinus fontinalis) populations

  2012cites this paper
• Reduced fitness of Atlantic salmon released in the wild after one generation of captive breeding

  2012cites this paper
• Dynamics of introgressive hybridization assessed by SNP population genomics of coding genes in stocked brook charr (Salvelinus fontinalis)

  2012cites this paper
• Differences in transcription levels among wild, domesticated, and hybrid Atlantic salmon (Salmo salar) from two environments

  2012cites this paper
• Additive, non-additive and maternal effects of cytokine transcription in response to immunostimulation with Vibrio vaccine in Chinook salmon (Oncorhynchus tshawytscha)

  2012cites this paper
• Effects of environmental stress on mRNA expression levels of seven genes related to oxidative stress and growth in Atlantic salmon Salmo salar L. of farmed, hybrid and wild origin

  2012influential citation
• Breeding success of four male life history types of spring Chinook Salmon spawning in an artificial stream

  2012cites this paper
• Directed graphical modeling of gene expression profile underlying salmonids reproductive behavior

  2012cites this paper
• Gene expression analysis for the identification of selection and local adaptation in fishes.

  2011cites this paper
• Wild and farmed salmon in Norway—A review

  2011cites this paper
• GENETIC ARCHITECTURE OF PHENOTYPIC AND TRANSCRIPTIONAL VARIATION IN SALMON

  2011influential citation
• Introgression of domesticated alleles into a wild trout genotype and the impact on seasonal survival in natural lakes

  2011cites this paper
• Long-term experimental hybrid swarms between moderately incompatible Tigriopus californicus populations: hybrid inferiority in early generations yields to hybrid superiority in later generations

  2011cites this paper
• Comparative seawater performance and deformity prevalence in out-of-season diploid and triploid Atlantic salmon (Salmo salar) post-smolts.

  2011cites this paper
• Temporal change in genetic integrity suggests loss of local adaptation in a wild Atlantic salmon (Salmo salar) population following introgression by farmed escapees

  2011cites this paper
• Rapid evolution of osmoregulatory function by modification of gene transcription in steelhead trout

  2011influential citation
• Genetic adaptation to captivity can occur in a single generation

  2011cites this paper
• Fish farming: socio-economic innovations to empower the small farmer

  2011cites this paper
• Genetic tools for restoration of fish populations

  2011cites this paper
• An effective method for the recapture of escaped farmed salmon

  2011cites this paper
• Genetiske effekter av rømt oppdrettslaks på ville laksebestander:: utforming av indikatorer

  2011cites this paper
• Early-rearing Environment and Mate Choice in Chinook Salmon (Oncorhynchus tshawytscha) Aquaculture: Effects on the Immune System

  2011cites this paper
• The Potential Ecological and Genetic Impacts of Aquaculture Biotechnologies: Eco‐Evolutionary Considerations for Managing the Blue Revolution

  2011cites this paper
• Étude transcriptomique de la réponse à l'hybridation chez l'omble de fontaine (Salvelinus fontinalis, Mitchill)

  2011cites this paper
• Investigating genetic change in wild populations: modelling gene flow from farm escapees

  2011cites this paper
• Génomique de la spéciation chez le grand corégone (Coregonus clupeaformis) : divergence adaptive et isolement reproducteur

  2010cites this paper
• Management strategies to control sexual maturation in sea-reared Atlantic salmon (Salmo salar L.): Biomass management, light-manipulation and sterility

  2010cites this paper
• The birds of Gongoni Forest Reserve, South Coast, Kenya

  2010cites this paper
• Pathway of effects of escaped aquaculture organisms or their reproductive material on natural ecosystems in Canada Séquence des effets liés aux organismes d'élevage évadés ou à leur matériel de reproduction sur les écosystèmes naturels au Canada

  2010cites this paper
• The Transcriptional Landscape of Cross-Specific Hybrids and Its Possible Link With Growth in Brook Charr (Salvelinus fontinalis Mitchill)

  2010cites this paper