Further use of nearly complete 28S and 18S rRNA genes to classify Ecdysozoa: 37 more arthropods and a kinorhynch.

No abstract is available for this paper.

• Publication year

  2006

• Venue

  Molecular Phylogenetics and Evolution

• Publication date

  2006-09-01

• Fields of study

  Biology, Medicine

• Identifiers
  DOI 10.1016/J.YMPEV.2006.04.021PMID 16781168
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Conflict between datasets and phylogeny of centipedes: an analysis based on seven genes and morphology

  2006cited by this paper
• Poor taxon sampling, poor character sampling, and non‐repeatable analyses of a contrived dataset do not provide a more credible estimate of insect phylogeny: a reply to Kjer

  2005cited by this paper
• Covarion structure in plastid genome evolution: a new statistical test.

  2005cited by this paper
• Relationships within the Pancrustacea: Examining the influence of additional Malacostracan 18S and 28S rDNA

  2005cited by this paper
• Consideration of RNA secondary structure significantly improves likelihood-based estimates of phylogeny: examples from the bilateria.

  2005cited by this paper
• Mantophasmatodea and phylogeny of the lower neopterous insects

  2005cited by this paper
• From variable to constant cell numbers: cellular characteristics of the arthropod nervous system argue against a sister-group relationship of Chelicerata and “Myriapoda” but favour the Mandibulata concept

  2005cited by this paper
• Pycnogonid affinities: a review

  2005cited by this paper
• Neuroanatomy of sea spiders implies an appendicular origin of the protocerebral segment

  2005cited by this paper
• The Opisthokonta and the Ecdysozoa may not be clades: stronger support for the grouping of plant and animal than for animal and fungi and stronger support for the Coelomata than Ecdysozoa.

  2005cited by this paper
• Phylogenetic analysis of Myriapoda using three nuclear protein-coding genes.

  2005influential reference
• Phylogeny of Molting Protostomes (Ecdysozoa) as Inferred from 18S and 28S rRNA Gene Sequences

  2005cited by this paper
• Peracarid monophyly and interordinal phylogeny inferred from nuclear small-subunit ribosomal DNA sequences (Crustacea: Malacostraca: Peracarida)

  2005cited by this paper
• Pancrustacean phylogeny: hexapods are terrestrial crustaceans and maxillopods are not monophyletic

  2005influential reference
• Early Cambrian arthropods—new insights into arthropod head and structural evolution

  2005cited by this paper
• The phylogenetic positions of three Basal-hexapod groups (protura, diplura, and collembola) based on ribosomal RNA gene sequences.

  2005cited by this paper
• The position of the Hymenoptera within the Holometabola as inferred from the mitochondrial genome of Perga condei (Hymenoptera: Symphyta: Pergidae).

  2005cited by this paper
• Mitochondrial genomes suggest that hexapods and crustaceans are mutually paraphyletic

  2005cited by this paper
• Multigene analyses of bilaterian animals corroborate the monophyly of Ecdysozoa, Lophotrochozoa, and Protostomia.

  2005cited by this paper
• Heads, Hox and the phylogenetic position of trilobites

  2005influential reference
• The biasing effect of compositional heterogeneity on phylogenetic estimates may be underestimated.

  2004cited by this paper
• Assembling the tree of life

  2004cited by this paper
• Aligned 18S and insect phylogeny.

  2004influential reference
• Neurogenesis in the chilopod Lithobius forficatus suggests more similarities to chelicerates than to insects

  2004cited by this paper
• Phylogenetic position of the Pentastomida and (pan)crustacean relationships

  2004cited by this paper
• A comparison of the mandibular gnathal edges in branchiopod crustaceans: implications for the phylogenetic position of the Laevicaudata

  2004cited by this paper
• When molecules and morphology clash: reconciling conflicting phylogenies of the Metazoa by considering secondary character loss

  2004cited by this paper
• Morphological data, extant Myriapoda, and the myriapod stem-group

  2004influential reference
• Phylogeny of Mantodea based on molecular data: evolution of a charismatic predator

  2004cited by this paper
• The colonization of land by animals: molecular phylogeny and divergence times among arthropods

  2004influential reference
• PAUP* [Phylogenetic Analysis Using Parsimony (and Other Methods)]

  2004cited by this paper
• Phylogeny of the Decapoda reptantia: Resolution using three molecular loci and morphology

  2004cited by this paper
• MORPHOLOGY AND TAXONOMY OF PALEOZOIC MILLIPEDES (DIPLOPODA: CHILOGNATHA: ARCHIPOLYPODA) FROM SCOTLAND

  2004cited by this paper
• Are crustaceans monophyletic

  2004influential reference
• Ecdysozoan phylogeny and Bayesian inference: first use of nearly complete 28S and 18S rRNA gene sequences to classify the arthropods and their kin.

  2004influential reference
• Phylogeny of elasmobranchs based on LSU and SSU ribosomal RNA genes.

  2004influential reference
• Investigations into the phylogenetic position of Micrognathozoa using four molecular loci

  2004influential reference
• Covarion shifts cause a long-branch attraction artifact that unites microsporidia and archaebacteria in EF-1alpha phylogenies.

  2004cited by this paper
• Adding mitochondrial sequence data (16S rRNA and cytochrome c oxidase subunit I) to the phylogeny of centipedes (Myriapoda: Chilopoda): an analysis of morphology and four molecular loci

  2004influential reference
• Is Ellipura monophyletic? A combined analysis of basal hexapod relationships with emphasis on the origin of insects

  2004influential reference
• Mechanisms underlying the evolution and maintenance of functionally heterogeneous 18S rRNA genes in Apicomplexans.

  2004cited by this paper
• Model selection and model averaging in phylogenetics: advantages of akaike information criterion and bayesian approaches over likelihood ratio tests.

  2004cited by this paper
• The problem with “the Paleoptera Problem:” sense and sensitivity

  2003cited by this paper
• Hexapod Origins: Monophyletic or Paraphyletic?

  2003cited by this paper
• The compound eye of Scutigera coleoptrata (Linnaeus, 1758) (Chilopoda: Notostigmophora): an ultrastructural reinvestigation that adds support to the Mandibulata concept

  2003cited by this paper
• Stability in phylogenetic formulations and its relationship to nodal support.

  2003cited by this paper
• Loss and recovery of wings in stick insects

  2003cited by this paper
• Conserved and convergent organization in the optic lobes of insects and isopods, with reference to other crustacean taxa

  2003cited by this paper
• Molecules, development and fossils in the study of metazoan evolution; Articulata versus Ecdysozoa revisited.

  2003cited by this paper
• Millipede phylogeny revisited in the light of the enigmatic order Siphoniulida

  2003influential reference
• Comparative analysis of neurogenesis in the myriapod Glomeris marginata (Diplopoda) suggests more similarities to chelicerates than to insects

  2003cited by this paper
• When Being “Most Likely” Is Not Enough: Examining the Performance of Three Uses of the Parametric Bootstrap in Phylogenetics

  2003influential reference
• The mandibular gnathal edges : homologous structures throughout Mandibulata?

  2003cited by this paper
• SEM studies on the early larval development of Triops cancriformis (Bosc)(Crustacea: Branchiopoda, Notostraca)

  2003cited by this paper
• Evaluating hypotheses of deuterostome phylogeny and chordate evolution with new LSU and SSU ribosomal DNA data.

  2002influential reference
• Phylogeny and Systematic Position of Opiliones: A Combined Analysis of Chelicerate Relationships Using Morphological and Molecular Data 1

  2002cited by this paper
• A Larval Sea Spider (Arthropoda: Pycnogonida) from the Upper Cambrian ‘orsten’ of Sweden, and the Phylogenetic Position of Pycnogonids

  2002cited by this paper
• The phylogenetic significance of crustacean optic neuropils and chiasmata: A re‐examination

  2002influential reference
• Ultrastructure, Biology, and Phylogenetic Relationships of Kinorhyncha1

  2002influential reference
• The Articulata hypothesis – or what is a segment?

  2002cited by this paper
• Early neurogenesis in the horseshoe crab Limulus polyphemus and its implication for arthropod relationships.

  2002cited by this paper
• 6 MYRIAPOD PHYLOGENY AND THE RELATIONSHIPS OF CHILOPODA

  2002cited by this paper
• Overcredibility of molecular phylogenies obtained by Bayesian phylogenetics

  2002cited by this paper
• Phylogenetic relationships within the Phyllopoda (Crustacea, Branchiopoda) based on mitochondrial and nuclear markers.

  2002cited by this paper
• Bayesian phylogenetics using an RNA substitution model applied to early mammalian evolution.

  2002cited by this paper
• Testing the new animal phylogeny: first use of combined large-subunit and small-subunit rRNA gene sequences to classify the protostomes.

  2002influential reference
• The European database on small subunit ribosomal RNA

  2002cited by this paper
• Molecular Systematics and Evolution: Theory and Practice

  2002cited by this paper
• DNA multiple sequence alignments.

  2002influential reference
• Current advances in the phylogenetic reconstruction of metazoan evolution. A new paradigm for the Cambrian explosion?

  2002influential reference
• Mecoptera is paraphyletic: multiple genes and phylogeny of Mecoptera and Siphonaptera

  2002cited by this paper
• Phylogeny of the holometabolous insect orders: molecular evidence

  2002cited by this paper
• An insect molecular clock dates the origin of the insects and accords with palaeontological and biogeographic landmarks.

  2002influential reference
• The Tetraconata concept: hexapod-crustacean relationships and the phylogeny of Crustacea

  2002influential reference
• Increased taxon sampling greatly reduces phylogenetic error.

  2002cited by this paper
• Testing a covariotide model of DNA substitution.

  2002cited by this paper
• The interrelationships of metazoan parasites: a review of phylum-and higher-level hypotheses from recent morphological and molecular phylogenetic analyses.

  2001cited by this paper
• Hox genes and the phylogeny of the arthropods.

  2001influential reference
• Bayesian Inference of Phylogeny and Its Impact on Evolutionary Biology

  2001influential reference
• Mitochondrial protein phylogeny joins myriapods with chelicerates

  2001influential reference
• Arthropod phylogeny based on eight molecular loci and morphology

  2001influential reference
• Universal trees based on large combined protein sequence data sets

  2001cited by this paper
• The origin of crustaceans: new evidence from the Early Cambrian of China

  2001cited by this paper
• Maximum-likelihood phylogenetic analysis under a covarion-like model.

  2001cited by this paper
• Mathematical Elegance with Biochemical Realism: The Covarion Model of Molecular Evolution

  2001cited by this paper
• Rate acceleration and long-branch attraction in a conserved gene of cryptic daphniid (Crustacea) species.

  2001cited by this paper
• Elongation factor-2: a useful gene for arthropod phylogenetics.

  2001influential reference
• MRBAYES: Bayesian inference of phylogenetic trees

  2001cited by this paper
• The Phylogeny of the Extant Hexapod Orders

  2001influential reference
• Some Unusual Small-Subunit Ribosomal RNA Sequences of Metazoans

  2001cited by this paper
• Arthropod rDNA phylogeny revisited: A consistency analysis using Monte Carlo simulation

  2001influential reference
• Ecdysozoa : the relationship between Cycloneuralia and Panarthropoda

  2001influential reference
• Phylogenetic analysis of the Malacostraca (Crustacea)

  2001influential reference
• Myriapoda and the ancestry of the hexapoda

  2001cited by this paper
• Are the insects terrestrial crustaceans? A discussion of some new facts and arguments and the proposal of the proper name 'Tetraconata' for the monophyletic unit Crustacea + Hexapoda

  2001influential reference
• MRBAYES : Bayesian inference of phylogeny

  2001cited by this paper
• The complete sequence of the mitochondrial genome of the crustacean Penaeus monodon: are malacostracan crustaceans more closely related to insects than to branchiopods?

  2000influential reference
• The transformation from monocondylous to dicondylous mandibles in the Insecta.

  2000cited by this paper
• PAUP* Phylogenetic analysis using parsimony (*and other methods) Version 4

  2000influential reference
• The mandible of silverfish (Insecta: Zygentoma) and mayflies (Ephemeroptera): its morphology and phylogenetic significance.

  2000cited by this paper

• The past and present of a mute cricket: a re-understanding of the Goniogryllus Chopard, 1936 based on an integrative taxonomic study (Orthoptera: Gryllinae; Gryllini; Brachytrypina)

  2025cites this paper
• Molecular Systematics of Gryllidea Based on Mitochondrial and Ribosomal DNA Data

  2025cites this paper
• Arthropod Phylotranscriptomics With a Special Focus on the Basal Phylogeny of the Myriapoda

  2024cites this paper
• A multiplex direct PCR method for the rapid and accurate discrimination of three species of spider mites (Acari: Tetranychidae) in fruit orchards in Beijing

  2024cites this paper
• Tectonically driven climate change and the spread of temperate biomes: Insights from dragon pseudoscorpions (Pseudotyrannochthoniidae), a globally distributed arachnid lineage

  2024cites this paper
• The Systematics of the Trematoda.

  2024cites this paper
• Redescription of Raillietiella mottae (Raillietiellidae: Pentastomida) a generalist parasite of insectivorous lizards: phenotypic plasticity revealed by molecular data

  2024cites this paper
• Major revisions in pancrustacean phylogeny and evidence of sensitivity to taxon sampling.

  2023cites this paper
• Molecular Identification and Phylogenetic Analysis of Laelapidae Mites (Acari: Mesostigmata)

  2023cites this paper
• Mitogenomics supports the monophyly of Mysidacea and Peracarida (Malacostraca)

  2022cites this paper
• Major revisions in pancrustacean phylogeny with recommendations for resolving challenging nodes

  2022cites this paper
• Neither leg nor jaw—nor always the same: a critical revision of the eumalacostracan maxilliped

  2022cites this paper
• Phylogenomic analyses of mud dragons (Kinorhyncha).

  2021cites this paper
• Comprehensive Species Sampling and Sophisticated Algorithmic Approaches Refute the Monophyly of Arachnida

  2021cites this paper
• Comparative analysis of the insect mobile genetic element repertoire and its influence on genome size dynamics

  2020cites this paper
• The Pancrustacean Conundrum: A Conflicted Phylogeny with Emphasis on Crustacea

  2020cites this paper
• Going Deeper into High and Low Phylogenetic Relationships of Protura

  2019cites this paper
• The Systematics of the Trematoda.

  2019cites this paper
• Ribosomal DNA internal transcribed spacer 2 sequence analysis and phylogenetic comparison of seven cockroach species in northwestern Iran

  2019cites this paper
• Towards a barnacle tree of life: integrating diverse phylogenetic efforts into a comprehensive hypothesis of thecostracan evolution

  2019cites this paper
• Characterization of tongue worm (Pentastomida) chitin supports α- rather than β-chitin

  2019cites this paper
• Fine Structure of the Integumentary Cuticles and Alimentary Tissues of Pycnophyid

  2019influential citation
• The mitochondrial genomes of palaeopteran insects and insights into the early insect relationships

  2019cites this paper
• Chapter 2 The Systematics of the Trematoda

  2019cites this paper
• A Critical Appraisal of the Placement of Xiphosura (Chelicerata) with Account of Known Sources of Phylogenetic Error.

  2019cites this paper
• How dynamic could be the 45S rDNA cistron? An intriguing variability in a grasshopper species revealed by integration of chromosomal and genomic data

  2019cites this paper
• Radiation, diversity and environmental expansion of Early Ordovician ostracods: a view from the Southern Hemisphere

  2018cites this paper
• The mitochondrial genome of Caenis sp. (Ephemeroptera: Caenidae) and the phylogeny of Ephemeroptera in Pterygota

  2018cites this paper
• Reanalyzing the Palaeoptera problem - The origin of insect flight remains obscure.

  2018cites this paper
• Current views on chelicerate phylogeny—A tribute to Peter Weygoldt

  2018cites this paper
• Current Understanding of Ecdysozoa and its Internal Phylogenetic Relationships.

  2017cites this paper
• Gene Regulatory Networks, Homology, and the Early Panarthropod Fossil Record.

  2017cites this paper
• Current understanding of Ecdysozoa and its internal phylogenetic 1 relationships 2 3

  2017cites this paper
• An optional C-terminal domain is ancestral in α-amylases of bilaterian animals

  2017cites this paper
• RETRACTED ARTICLE: Molecular Phylogeny and Revision of Copepod Orders (Crustacea: Copepoda)

  2017cites this paper
• The Function of FoxB During Limb Development and Axis Formation in the Spider Parasteatoda tepidariorum

  2017cites this paper
• Using mitochondrial genomes to infer phylogenetic relationships among the oldest extant winged insects (Palaeoptera)

  2017influential citation
• Evolutionary origin of type IV classical cadherins in arthropods

  2017cites this paper
• Diversity of Kinorhyncha in Japan and Phylogenetic Relationships of the Phylum

  2017cites this paper
• A systematic revision of the South African pseudoscorpions of the family Geogarypidae (Arachnida: Pseudoscorpiones)

  2017cites this paper
• The nervous and visual systems of onychophorans and tardigrades: learning about arthropod evolution from their closest relatives

  2017cites this paper
• Assessing segmental versus non-segmental features in the ventral nervous system of onychophorans (velvet worms)

  2017cites this paper
• Retraction Note: Molecular Phylogeny and Revision of Copepod Orders (Crustacea: Copepoda)

  2017cites this paper
• Phylogeny mandalas for illustrating the Tree of Life.

  2017cites this paper
• Molecular Phylogeny and Revision of Copepod Orders (Crustacea: Copepoda)

  2017cites this paper
• The behavioral ecology of amblypygids

  2016cites this paper
• Contrasting evolutionary patterns of 28S and ITS rRNA genes reveal high intragenomic variation in Cephalenchus (Nematoda): Implications for species delimitation.

  2016cites this paper
• Insects and Ecdysozoa, Diversification of

  2016cites this paper
• The presence of α-chitin in Tardigrada with comments on chitin in the Ecdysozoa

  2016cites this paper
• The role of next generation sequencing technologies in shaping the future of insect molecular systematics

  2016cites this paper
• The Mineralized Exoskeletons of Crustaceans

  2016cites this paper
• The first troglobitic species of Gymnobisiidae (Pseudoscorpiones : Neobisioidea), from Table Mountain (Western Cape Province, South Africa) and its phylogenetic position

  2016cites this paper
• Progress, pitfalls and parallel universes: a history of insect phylogenetics

  2016cites this paper
• Deterministic processes dominate nematode community structure in the Fynbos Mediterranean heathland of South Africa

  2016cites this paper
• Phylogenetic position of Loricifera inferred from nearly complete 18S and 28S rRNA gene sequences

  2015cites this paper
• Diversification in the Hexapoda : a molecular phylogenetic perspective

  2015cites this paper
• Genetic diversity and phylogeography of the blacklegged tick, Ixodes scapularis, and an associated bacterium, Anaplasma phagocytophilum

  2015cites this paper
• Antygomonas caeciliae, a new kinorhynch from the Mediterranean Sea, with report of mitochondrial genetic data for the phylum

  2015cites this paper
• Antygomonas caeciliae, a new kinorhynch from the Mediterranean Sea, with report of mitochondrial genetic data for the phylum

  2015cites this paper
• The systematic position and phylogenetic relationships of Asiobaccha Violovitsh (Diptera, Syrphidae)

  2015cites this paper
• Fine Structure of the Integumentary Cuticles and Alimentary Tissues of Pycnophyid Kinorhynchs Pycnophyes oshoroensis and Kinorhynchus yushini (Kinorhyncha, Homalorhagida)

  2015cites this paper
• Explosive radiation or uninformative genes? Origin and early diversification of tachinid flies (Diptera: Tachinidae).

  2015cites this paper
• High mitochondrial DNA sequence divergence in Sminthurus viridis (Linnaeus) (Collembola: Sminthuridae) from New Zealand

  2014cites this paper
• Where Taxonomy Based on Subtle Morphological Differences Is Perfectly Mirrored by Huge Genetic Distances: DNA Barcoding in Protura (Hexapoda)

  2014cites this paper
• Phylogenetic Analysis of the Spider Mite Sub-Family Tetranychinae (Acari: Tetranychidae) Based on the Mitochondrial COI Gene and the 18S and the 5′ End of the 28S rRNA Genes Indicates That Several Genera Are Polyphyletic

  2014cites this paper
• Phylogenetic position of Myriapoda revealed by 454 transcriptome sequencing.

  2014cites this paper
• Molecular phylogeny of soft ticks (Ixodida: Argasidae) inferred from mitochondrial genome and nuclear rRNA sequences.

  2014cites this paper
• The systematics of the trematoda.

  2014cites this paper
• The first phylogenetic analysis of Palpigradi (Arachnida) – the most enigmatic arthropod order

  2014cites this paper
• The ovary structure and oogenesis in the basal crustaceans and hexapods. Possible phylogenetic significance.

  2014cites this paper
• The oldest known priapulid‐like scalidophoran animal and its implications for the early evolution of cycloneuralians and ecdysozoans

  2014cites this paper
• Prediction of the first neuropeptides from a member of the Remipedia (Arthropoda, Crustacea).

  2014cites this paper
• Deep metazoan phylogeny : the backbone of the tree of life : new insights from analyses of molecules, morphology, and theory of data analysis

  2014cites this paper
• Evaluating topological conflict in centipede phylogeny using transcriptomic data sets.

  2014cites this paper
• The first phylogenetic analysis of Palpigradi (Arachnida) – the most enigmatic arthropod order

  2014cites this paper
• Six chitinases from oriental river prawn Macrobrachium nipponense: cDNA characterization, classification and mRNA expression during post-embryonic development and moulting cycle.

  2014cites this paper
• Comparative myoanatomy of Echinoderes (Kinorhyncha): a comprehensive investigation by CLSM and 3D reconstruction

  2014cites this paper
• Embryonic neurogenesis in Pseudopallene sp. (Arthropoda, Pycnogonida) includes two subsequent phases with similarities to different arthropod groups

  2013cites this paper
• Phylotranscriptomics to bring the understudied into the fold: monophyletic ostracoda, fossil placement, and pancrustacean phylogeny.

  2013cites this paper
• The identification of concerted convergence in insect heads corroborates palaeoptera.

  2013cites this paper
• Neural Markers Reveal a One-Segmented Head in Tardigrades (Water Bears)

  2013cites this paper
• Selective neuronal staining in tardigrades and onychophorans provides insights into the evolution of segmental ganglia in panarthropods

  2013cites this paper
• Correction: A Unique Box in 28S rRNA Is Shared by the Enigmatic Insect Order Zoraptera and Dictyoptera

  2013cites this paper
• EF-hand proteins in onychophorans as compared to tardigrades and other ecdysozoans

  2013cites this paper
• Serine codon-usage bias in deep phylogenomics: pancrustacean relationships as a case study.

  2013cites this paper
• Molecular timetrees reveal a Cambrian colonization of land and a new scenario for ecdysozoan evolution.

  2013cites this paper
• Molecular phylogeny of kinorhynchs.

  2013cites this paper
• The Arthropoda: A Phylogenetic Framework

  2013influential citation
• 1 Molecular phylogeny of kinorhynchs

  2013cites this paper
• Molecular phylogenetic analyses support the monophyly of Hexapoda and suggest the paraphyly of Entognatha

  2013influential citation
• Morphology of the antennae of basal hexapods and their phylogenetic relevance

  2013influential citation
• Decisive Data Sets in Phylogenomics: Lessons from Studies on the Phylogenetic Relationships of Primarily Wingless Insects

  2013cites this paper
• A comparative analysis of complete mitochondrial genomes among Hexapoda.

  2013cites this paper
• Franciscideres gen. nov. – a new, highly aberrant kinorhynch genus from Brazil, with an analysis of its phylogenetic position

  2013cites this paper
• Phylogenetic Relationships of Primarily Wingless Insects

  2013cites this paper
• A Unique Box in 28S rRNA Is Shared by the Enigmatic Insect Order Zoraptera and Dictyoptera

  2013cites this paper
• Relaxed phylogenetics and the palaeoptera problem: resolving deep ancestral splits in the insect phylogeny.

  2013cites this paper
• The expression of limb gap genes in the mite Archegozetes longisetosus reveals differential patterning mechanisms in chelicerates

  2013influential citation
• Gene expression under multiple stressors in Daphnia pulex

  2012cites this paper
• A cause for consilience: Utilizing multiplegenomic data types to resolve problematicnodes within Arthropoda and Ecdysozoa

  2012influential citation