Intestinal MicrobiOMICS to define health and disease in human and mice.

No abstract is available for this paper.

• Publication year

  2012

• Venue

  Current Pharmaceutical Biotechnology

• Publication date

  2012-03-31

• Fields of study

  Biology, Medicine

• Identifiers
  DOI 10.2174/138920112799857567PMID 22122483
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Enterotypes of the human gut microbiome

  2011cited by this paper
• Extensive personal human gut microbiota culture collections characterized and manipulated in gnotobiotic mice

  2011cited by this paper
• Ribosomal RNA diversity predicts genome diversity in gut bacteria and their relatives

  2010cited by this paper
• Succession of microbial consortia in the developing infant gut microbiome

  2010cited by this paper
• Molecular Characterisation of the Faecal Microbiota in Patients with Type II Diabetes

  2010cited by this paper
• Guidance for substantiating the evidence for beneficial effects of probiotics: current status and recommendations for future research.

  2010cited by this paper
• A human gut microbial gene catalogue established by metagenomic sequencing

  2010cited by this paper
• Never take candy from a stranger: the role of the bacterial glycome in host-pathogen interactions.

  2010cited by this paper
• Results from the Periodontitis and Vascular Events (PAVE) Study: a pilot multicentered, randomized, controlled trial to study effects of periodontal therapy in a secondary prevention model of cardiovascular disease.

  2009cited by this paper
• Human gut microbiota in obesity and after gastric bypass

  2009cited by this paper
• Metabolomics analysis reveals large effects of gut microflora on mammalian blood metabolites

  2009cited by this paper
• Identification of Novel Serological Biomarkers for Inflammatory Bowel Disease Using Escherichia coli Proteome Chip*

  2009cited by this paper
• Obesity and the microbiota.

  2009cited by this paper
• The gut microbiota ecology: a new opportunity for the treatment of metabolic diseases?

  2009cited by this paper
• Top-down systems biology modeling of host metabotype-microbiome associations in obese rodents.

  2009cited by this paper
• Gut microbes define liver cancer risk in mice exposed to chemical and viral transgenic hepatocarcinogens

  2009cited by this paper
• Intestinal microbiota during infancy and its implications for obesity.

  2009cited by this paper
• Adaptation of protein expression by Escherichia coli in the gastrointestinal tract of gnotobiotic mice.

  2009cited by this paper
• Gut microbiome modulates the toxicity of hydrazine: a metabonomic study.

  2009cited by this paper
• Induction of intestinal Th17 cells by segmented filamentous bacteria.

  2009cited by this paper
• Topographical variation in murine intestinal metabolic profiles in relation to microbiome speciation and functional ecological activity.

  2009cited by this paper
• Changes in gut microbiota control inflammation in obese mice through a mechanism involving GLP-2-driven improvement of gut permeability

  2009cited by this paper
• Studying the human gut microbiota in the trans-omics era--focus on metagenomics and metabonomics.

  2009cited by this paper
• Pre- and probiotics for human skin.

  2009cited by this paper
• A core gut microbiome in obese and lean twins

  2008cited by this paper
• Changes in Gut Microbiota Control Metabolic Endotoxemia-Induced Inflammation in High-Fat Diet–Induced Obesity and Diabetes in Mice

  2008cited by this paper
• Proteomic identification of biomarkers related to Helicobacter pylori‐associated gastroduodenal disease: Challenges and opportunities

  2008cited by this paper
• Systemic multicompartmental effects of the gut microbiome on mouse metabolic phenotypes

  2008cited by this paper
• Faecalibacterium prausnitzii is an anti-inflammatory commensal bacterium identified by gut microbiota analysis of Crohn disease patients

  2008cited by this paper
• Energy intake is associated with endotoxemia in apparently healthy men.

  2008cited by this paper
• 1H NMR metabolite profiling of feces as a tool to assess the impact of nutrition on the human microbiome

  2008cited by this paper
• Evolution of Mammals and Their Gut Microbes

  2008cited by this paper
• Intestinal gluconeogenesis is a key factor for early metabolic changes after gastric bypass but not after gastric lap-band in mice.

  2008cited by this paper
• Specific microbiota direct the differentiation of IL-17-producing T-helper cells in the mucosa of the small intestine.

  2008cited by this paper
• Shotgun metaproteomics of the human distal gut microbiota

  2008cited by this paper
• The Human Microbiome Project

  2007cited by this paper
• TH-17 cells in the circle of immunity and autoimmunity

  2007cited by this paper
• Th17 cells and mucosal host defense.

  2007cited by this paper
• Detection of Actinobacteria cultivated from environmental samples reveals bias in universal primers

  2007cited by this paper
• Effect of primer mismatch, annealing temperature and PCR cycle number on 16S rRNA gene-targetting bacterial community analysis.

  2007cited by this paper
• Advanced sequencing technologies and their wider impact in microbiology

  2007cited by this paper
• Metabolic Endotoxemia Initiates Obesity and Insulin Resistance

  2007cited by this paper
• Role of the innate immune system and host-commensal mutualism.

  2006cited by this paper
• An obesity-associated gut microbiome with increased capacity for energy harvest

  2006cited by this paper
• Microbial ecology: Human gut microbes associated with obesity

  2006cited by this paper
• The gut flora as a forgotten organ

  2006cited by this paper
• Application of a High-Density Oligonucleotide Microarray Approach To Study Bacterial Population Dynamics during Uranium Reduction and Reoxidation

  2006cited by this paper
• Metaproteomics Approach To Study the Functionality of the Microbiota in the Human Infant Gastrointestinal Tract

  2006cited by this paper
• The structures of Escherichia coli O-polysaccharide antigens.

  2006cited by this paper
• Reciprocal gut microbiota transplants from zebrafish and mice to germ-free recipients reveal host habitat selection.

  2006cited by this paper
• Global systems biology, personalized medicine and molecular epidemiology

  2006cited by this paper
• Abnormal microbiota composition in the ileocolonic mucosa of Crohn's disease patients as revealed by polymerase chain reaction‐denaturing gradient gel electrophoresis

  2006cited by this paper
• A lectin microarray approach for the rapid analysis of bacterial glycans

  2006cited by this paper
• Bacterial glycoproteomics.

  2006cited by this paper
• Metabolic profiling reveals a contribution of gut microbiota to fatty liver phenotype in insulin-resistant mice

  2006cited by this paper
• UniFrac – An online tool for comparing microbial community diversity in a phylogenetic context

  2006cited by this paper
• Genomes for all.

  2006cited by this paper
• Genome sequencing in microfabricated high-density picolitre reactors

  2005cited by this paper
• Biological foundation for periodontitis as a potential risk factor for atherosclerosis.

  2005cited by this paper
• Who controls the crowd? New findings and old questions about the intestinal microflora.

  2005cited by this paper
• Obesity alters gut microbial ecology.

  2005cited by this paper
• A dynamic partnership: celebrating our gut flora.

  2005cited by this paper
• Periodontal Microbiota and Carotid Intima-Media Thickness: The Oral Infections and Vascular Disease Epidemiology Study (INVEST)

  2005cited by this paper
• Host-Bacterial Mutualism in the Human Intestine

  2005cited by this paper
• Physiological basis for novel drug therapies used to treat the inflammatory bowel diseases I. Pathophysiological basis and prospects for probiotic therapy in inflammatory bowel disease.

  2005cited by this paper
• Proteomic analysis of cell surface proteins from Clostridium difficile

  2005cited by this paper
• Diversity of the Human Intestinal Microbial Flora

  2005cited by this paper
• Immunity, Inflammation, and Allergy in the Gut

  2005cited by this paper
• Bioinformatics for Whole-Genome Shotgun Sequencing of Microbial Communities

  2005cited by this paper
• A proteomic view of Bifidobacterium infantis generated by multi‐dimensional chromatography coupled with tandem mass spectrometry

  2005cited by this paper
• Porphyromonas gingivalis Bacteremia Induces Coronary and Aortic Atherosclerosis in Normocholesterolemic and Hypercholesterolemic Pigs

  2005cited by this paper
• Inflammation, stress, and diabetes.

  2005cited by this paper
• Interactions between commensal intestinal bacteria and the immune system

  2004cited by this paper
• Inflammation: the link between insulin resistance, obesity and diabetes.

  2004cited by this paper
• The KEGG resource for deciphering the genome

  2004cited by this paper
• Glycoprofiling with micro-arrays of glycoconjugates and lectins.

  2004cited by this paper
• The Campylobacter jejuni general glycosylation system is important for attachment to human epithelial cells and in the colonization of chicks.

  2004cited by this paper
• STRING: known and predicted protein–protein associations, integrated and transferred across organisms

  2004cited by this paper
• Gnotobiotic zebrafish reveal evolutionarily conserved responses to the gut microbiota.

  2004cited by this paper
• The gut microbiota as an environmental factor that regulates fat storage.

  2004cited by this paper
• Intragenomic heterogeneity between multiple 16S ribosomal RNA operons in sequenced bacterial genomes.

  2003cited by this paper
• Global metabolite analysis: the influence of extraction methodology on metabolome profiles of Escherichia coli.

  2003cited by this paper
• Review and re-analysis of domain-specific 16S primers.

  2003cited by this paper
• Alterations of the dominant faecal bacterial groups in patients with Crohn's disease of the colon

  2003cited by this paper
• Sequence information can be obtained from single DNA molecules

  2003cited by this paper
• The Human Genome Project: Lessons from Large-Scale Biology

  2003cited by this paper
• Plant functional genomics

  2002cited by this paper
• Mucosal flora in inflammatory bowel disease.

  2002cited by this paper
• The host-microbe interface within the gut.

  2002cited by this paper
• Campylobacter Protein Glycosylation Affects Host Cell Interactions

  2002cited by this paper
• Structure of the N-Linked Glycan Present on Multiple Glycoproteins in the Gram-negative Bacterium, Campylobacter jejuni *

  2002cited by this paper
• Development of indole-3-propionic acid (OXIGON™) for alzheimer’s disease

  2002cited by this paper
• Differences in rDNA libraries of faecal bacteria derived from 10- and 25-cycle PCRs.

  2002cited by this paper
• A comparison of cell and tissue extraction techniques using high‐resolution 1H‐NMR spectroscopy

  2002cited by this paper
• Commensal Host-Bacterial Relationships in the Gut

  2001cited by this paper
• Allergy development and the intestinal microflora during the first year of life.

  2001cited by this paper
• Indole‐3‐propionic acid, a melatonin‐related molecule, protects hepatic microsomal membranes from iron‐induced oxidative damage: Relevance to cancer reduction

  2001cited by this paper
• Potent Neuroprotective Properties against the Alzheimer β-Amyloid by an Endogenous Melatonin-related Indole Structure, Indole-3-propionic Acid*

  1999cited by this paper
• A sequencing method based on real-time pyrophosphate.

  1998cited by this paper
• Temperature Gradient Gel Electrophoresis Analysis of 16S rRNA from Human Fecal Samples Reveals Stable and Host-Specific Communities of Active Bacteria

  1998cited by this paper

• Exploring Computational Advancements in ADME: Essential Insights for Drug Disposition.

  2024cites this paper
• Effects of the probiotic Bacillus coagulans BC69 on the metabolic and histological alterations induced by a high-sugar and high-fat diet in C57BL/6J mice.

  2023cites this paper
• Efficacy and safety of Zicuiyin decoction on diabetic kidney disease: A multicenter, randomized controlled trial.

  2022cites this paper
• Evolution of Gut Microbiome and Metabolome during Stage 1 Necrotizing Enterocolitis: a Case-Control Study

  2020cites this paper
• Evolution of Gut Microbiome and Metabolome in Suspected Necrotizing Enterocolitis: A Case-Control Study

  2020cites this paper
• A Two‐Week Treatment with Plant Extracts Changes Gut Microbiota, Caecum Metabolome, and Markers of Lipid Metabolism in ob/ob Mice

  2019cites this paper
• Gut microbiota and metabolomic changes associated to the beneficial effects of polyphenols on obesity

  2019cites this paper
• Immunonutritional contribution of gut microbiota to fatty liver disease.

  2019cites this paper
• Endogenous Antioxidant Overexpression as an Adjuvant to Diet or Exercise Intervention as Therapy to Counteract Obesity and Beneficially Shift the Gut Microbiome

  2019cites this paper
• Catechin supplemented in a FOS diet induces weight loss by altering cecal microbiota and gene expression of colonic epithelial cells.

  2018cites this paper
• Oral health and microbiota status in professional rugby players: A case-control study.

  2018cites this paper
• Nanocomposite of Half-Fin Anchovy Hydrolysates/Zinc Oxide Nanoparticles Exhibits Actual Non-Toxicity and Regulates Intestinal Microbiota, Short-Chain Fatty Acids Production and Oxidative Status in Mice

  2018cites this paper
• Molecular Paths Linking Metabolic Diseases, Gut Microbiota Dysbiosis and Enterobacteria Infections.

  2018cites this paper
• Recent findings within the microbiota–gut–brain–endocrine metabolic interactome

  2017cites this paper
• Agaro-Oligosaccharides Regulate Gut Microbiota and Adipose Tissue Accumulation in Mice.

  2017cites this paper
• The Microbiome in Visceral Medicine: Inflammatory Bowel Disease, Obesity and Beyond

  2017cites this paper
• Dietary Co-Metabolism within the Microbiota-Gut-Brain-Endocrine Metabolic Interactome

  2017cites this paper
• Transfer of dysbiotic gut microbiota has beneficial effects on host liver metabolism

  2017cites this paper
• Microbial Regulation of Glucose Metabolism and Insulin Resistance

  2017cites this paper
• The Co-Metabolism within the Gut-Brain Metabolic Interaction: Potential Targets for Drug Treatment and Design.

  2016cites this paper
• Proteomics applied to pediatric medicine: opportunities and challenges

  2016cites this paper
• The microbiota as an epigenetic control mechanism

  2016cites this paper
• Changes in Gut Microbiota in Rats Fed a High Fat Diet Correlate with Obesity-Associated Metabolic Parameters

  2015cites this paper
• Interactions between Gut Microbiota, Host Genetics and Diet Modulate the Predisposition to Obesity and Metabolic Syndrome.

  2015cites this paper
• Reshaping faecal gut microbiota composition by the intake of trans-resveratrol and quercetin in high-fat sucrose diet-fed rats.

  2015cites this paper
• Gut Microbiota and Metabolic Diseases: From Pathogenesis to Therapeutic Perspective

  2015cites this paper
• The Intestinal Microbiota in Inflammatory Bowel Disease.

  2015cites this paper
• Microbiome: Bacteria and the brain

  2014cites this paper
• Intestinal permeability – a new target for disease prevention and therapy

  2014cites this paper
• Managing the manager: gut microbes, stem cells and metabolism.

  2014cites this paper
• Drosophila as a model for intestinal dysbiosis and chronic inflammatory diseases.

  2014cites this paper
• The next ten years in neonatology: new directions in research

  2014cites this paper
• Far from the Eyes, Close to the Heart: Dysbiosis of Gut Microbiota and Cardiovascular Consequences

  2014cites this paper
• Pharmacogenomics and Gut Microbiota Biomarkers in Obesity

  2013cites this paper
• High-throughput 16S rRNA gene sequencing reveals alterations of intestinal microbiota in myalgic encephalomyelitis/chronic fatigue syndrome patients.

  2013cites this paper
• Advancing Weed Management Strategies Using Metagenomic Techniques

  2013cites this paper
• Gut microbiota and obesity: lessons from the microbiome.

  2013cites this paper
• Gut Feelings: Bacteria and the Brain

  2013cites this paper
• The gut microbiota profile is associated with insulin action in humans

  2013cites this paper
• A negative role for MyD88 in the resistance to starvation as revealed in an intestinal infection of Drosophila melanogaster with the Gram-positive bacterium Staphylococcus xylosus.

  2013cites this paper
• How microbiomes influence metazoan development: insights from history and Drosophila modeling of gut-microbe interactions.

  2013cites this paper
• Granular cell tumor of the appendix: a new case and review of the literature

  2013cites this paper
• Vers une meilleure compréhension des infections intestinales : études des relations hôte-pathogène chez l'organisme modèle Drosophila melanogaster

  2012cites this paper
• The gut microbiota profile is associated with insulin action in humans

  2012cites this paper
• Intestinal microbiocenosis in the obese patients with osteoarthritis

  2012cites this paper
• Microbes on-air: gut and tissue microbiota as targets in type 2 diabetes.

  2012cites this paper