Inter-site and inter-scanner diffusion MRI data harmonization

No abstract is available for this paper.

• Publication year

  2016

• Venue

  NeuroImage

• Publication date

  2016-07-01

• Fields of study

  Medicine, Computer Science, Engineering

• Identifiers
  DOI 10.1016/j.neuroimage.2016.04.041PMID 27138209PMCID PMC5367052
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Region of interest correction factors improve reliability of diffusion imaging measures within and across scanners and field strengths

  2015cited by this paper
• Harmonizing Diffusion MRI Data Across Multiple Sites and Scanners

  2015cited by this paper
• Development of image processing tools and procedures for analyzing multi-site longitudinal diffusion-weighted imaging studies

  2014cited by this paper
• MR Scanner Systems Should Be Adequately Characterized in Diffusion-MRI of the Breast

  2014cited by this paper
• Reliability of functional magnetic resonance imaging activation during working memory in a multi-site study: Analysis from the North American Prodrome Longitudinal Study

  2014cited by this paper
• Multisite longitudinal reliability of tract-based spatial statistics in diffusion tensor imaging of healthy elderly subjects

  2014cited by this paper
• Multi-site study of additive genetic effects on fractional anisotropy of cerebral white matter: Comparing meta and megaanalytical approaches for data pooling

  2014cited by this paper
• Reliability of neuroanatomical measurements in a multisite longitudinal study of youth at risk for psychosis

  2014cited by this paper
• Multi-site genetic analysis of diffusion images and voxelwise heritability analysis: A pilot project of the ENIGMA-DTI working group

  2013cited by this paper
• Variability in prostate and seminal vesicle delineations defined on magnetic resonance images, a multi-observer, -center and -sequence study

  2013cited by this paper
• Inter Subject Variability and Reproducibility of Diffusion Tensor Imaging within and between Different Imaging Sessions

  2013cited by this paper
• A multi-center study: Intra-scan and inter-scan variability of diffusion spectrum imaging

  2012cited by this paper
• A Validation Study of Multicenter Diffusion Tensor Imaging: Reliability of Fractional Anisotropy and Diffusivity Values

  2012cited by this paper
• The Human Connectome Project: A data acquisition perspective

  2012cited by this paper
• MultiCenter Reliability of Diffusion Tensor Imaging

  2012cited by this paper
• Assessment of the impact of the scanner-related factors on brain morphometry analysis with Brainvisa

  2011cited by this paper
• Quantification of accuracy and precision of multi-center DTI measurements: A diffusion phantom and human brain study

  2011cited by this paper
• Fourth-order tensor invariants in high angular resolution diffusion imaging

  2011cited by this paper
• Multicenter stability of diffusion tensor imaging measures: a European clinical and physical phantom study.

  2011cited by this paper
• Identical, but not the same: Intra-site and inter-site reproducibility of fractional anisotropy measures on two 3.0 T scanners

  2010influential reference
• Meta-analysis of neuroimaging data: A comparison of image-based and coordinate-based pooling of studies

  2009cited by this paper
• Image-based vs. Coordinate-based Meta-analysis

  2009cited by this paper
• Regularized, fast, and robust analytical Q‐ball imaging

  2007cited by this paper
• Orthogonal tensor invariants and the analysis of diffusion tensor magnetic resonance images

  2006cited by this paper
• Apparent diffusion coefficients from high angular resolution diffusion imaging: Estimation and applications

  2006cited by this paper
• Tract-based spatial statistics: Voxelwise analysis of multi-subject diffusion data

  2006cited by this paper
• Ways toward an early diagnosis in Alzheimer's disease: The Alzheimer's Disease Neuroimaging Initiative (ADNI)

  2005cited by this paper
• Q‐ball imaging

  2004cited by this paper
• Visualization and Analysis of Diffusion Tensor Fields

  2004cited by this paper
• Diffusion MRI of complex neural architecture.

  2003cited by this paper
• Rotation Invariant Spherical Harmonic Representation of 3D Shape Descriptors

  2003cited by this paper
• High angular resolution diffusion imaging reveals intravoxel white matter fiber heterogeneity

  2002cited by this paper
• A global optimisation method for robust affine registration of brain images

  2001cited by this paper
• Automated manifold surgery: constructing geometrically accurate and topologically correct models of the human cerebral cortex

  2001influential reference
• NeuroImage

  year unknowncited by this paper

• Diffusion MRI sampling schemes bias diffusion metrics and tractography

  2026cites this paper
• Revisiting the interpretation of axon diameter mapping using higher-order signal representations

  2026cites this paper
• Multimodal MRI integrating anti-motion multi-parametric mappings for investigating subcortical nuclei microstructural alterations in Huntington's disease.

  2026cites this paper
• The average does not represent the individual: White matter variability across the brain, across the population, and across the lifespan

  2026cites this paper
• TRAMFIX: TRavelling Across Melbourne for FIXel-based analysis (a reproducibility study)

  2025cites this paper
• Thermal noise lowers the accuracy of rotationally invariant harmonics of diffusion MRI data and their robustness to experimental variations

  2025cites this paper
• Mitigating inter-scanner heterogeneity in brain MRI data: Assessing its impact on association analyses and the effectiveness of ComBat harmonization in multi-site neuroimaging studies

  2025cites this paper
• Multimodal Deep Learning for Alzheimer's Disease Classification: A Practical Fusion Framework for Clinical Deployment

  2025influential citation
• The Evolving Role of Neuroimaging in Traumatic Brain Injury Research.

  2025cites this paper
• Cross‐site harmonization of diffusion MRI data without matched training subjects

  2025cites this paper
• Evaluating Transferability of ComBat Harmonization of Diffusion Tensor Magnetic Resonance Imaging Data

  2025cites this paper
• DDTracking: A Deep Generative Framework for Diffusion MRI Tractography with Streamline Local-Global Spatiotemporal Modeling

  2025cites this paper
• Harmonization in Magnetic Resonance Imaging: A Survey of Acquisition, Image-level, and Feature-level Methods

  2025cites this paper
• Harmonization of Structural Brain Connectivity Through Distribution Matching

  2025cites this paper
• Efficient and robust 3D blind harmonization for large domain gaps

  2025cites this paper
• Rethinking MRI as a measurement device through modular and portable pipelines

  2025cites this paper
• A multi-site, multi-modal travelling-heads resource for brain MRI harmonisation

  2025cites this paper
• Whole-brain white matter variation across childhood environments

  2025cites this paper
• Effect of a consistent reconstruction algorithm on inter‐scanner reproducibility in diffusion MRI

  2025cites this paper
• Discriminative latent representation harmonization of multicenter medical data

  2025cites this paper
• Clinical-ComBAT: a diffusion-weighted MRI harmonization method for clinical applications

  2025cites this paper
• DDEvENet: Evidence-based ensemble learning for uncertainty-aware brain parcellation using diffusion MRI

  2025cites this paper
• White matter microstructure alterations in social anxiety disorder - a mega-analysis across 12 cohorts in the ENIGMA-Anxiety Working Group.

  2025cites this paper
• Big Data, Small Bias: Harmonizing Diffusion MRI‐Based Structural Connectomes to Mitigate Site‐Related Bias in Data Integration

  2025cites this paper
• Harmonization of Structural Brain Connectivity through Distribution Matching

  2024cites this paper
• Denoising Improves Cross‐Scanner and Cross‐Protocol Test–Retest Reproducibility of Diffusion Tensor and Kurtosis Imaging

  2024cites this paper
• Brain Age Analysis and Dementia Classification using Convolutional Neural Networks trained on Diffusion MRI: Tests in Indian and North American Cohorts

  2024cites this paper
• Parsing altered brain connectivity in neurodevelopmental disorders by integrating graph-based normative modeling and deep generative networks

  2024cites this paper
• EVENet: Evidence-based Ensemble Learning for Uncertainty-aware Brain Parcellation Using Diffusion MRI

  2024cites this paper
• Geometry of the cumulant series in diffusion MRI

  2024cites this paper
• Impact of COVID-19 School Closures on White Matter Plasticity in the Reading Network

  2024cites this paper
• When Diffusion MRI Meets Diffusion Model: A Novel Deep Generative Model for Diffusion MRI Generation

  2024cites this paper
• Discernible interindividual patterns of global efficiency decline during theoretical brain surgery

  2024cites this paper
• A diffusion MRI tractography atlas for concurrent white matter mapping across Eastern and Western populations

  2024cites this paper
• Voxel-Wise Fusion of 3T and 7T Diffusion MRI Data to Extract more Accurate Fiber Orientations

  2024cites this paper
• MidRISH: Unbiased harmonization of rotationally invariant harmonics of the diffusion signal.

  2024cites this paper
• Executive functioning, behavior, and white matter microstructure in the chronic phase after pediatric mild traumatic brain injury: results from the adolescent brain cognitive development study

  2024cites this paper
• Reduced cross‐scanner variability using vendor‐agnostic sequences for single‐shell diffusion MRI

  2024cites this paper
• Harmonized diffusion MRI data and white matter measures from the Adolescent Brain Cognitive Development Study

  2024cites this paper
• Brain Age Analysis and Dementia Classification using Convolutional Neural Networks trained on Diffusion MRI: Tests in Indian and North American Cohorts

  2024cites this paper
• Image harmonization improves consistency of intra-rater delineations of MS lesions in heterogeneous MRI

  2024cites this paper
• Diffusion MRI with machine learning

  2024cites this paper
• A unified global tractography framework for automatic visual pathway reconstruction

  2023cites this paper
• RELIEF: A structured multivariate approach for removal of latent inter-scanner effects

  2023cites this paper
• Artificial intelligence-driven shimming for parallel high field nuclear magnetic resonance

  2023cites this paper
• White matter tract microstructure, macrostructure, and associated cortical gray matter morphology across the lifespan

  2023cites this paper
• Learning site-invariant features of connectomes to harmonize complex network measures

  2023cites this paper
• Adverse Outcome Following Mild Traumatic Brain Injury Is Associated with Microstructure Alterations at the Gray and White Matter Boundary

  2023cites this paper
• Harmonized diffusion MRI data and white matter measures from the baseline Adolescent Brain Cognitive Development (ABCD) study

  2023cites this paper
• MidRISH: Unbiased harmonization of rotationally invariant harmonics of the diffusion signal

  2023cites this paper
• Confounding Effects on the Performance of Machine Learning Analysis of Static Functional Connectivity Computed from rs-fMRI Multi-site Data

  2023cites this paper
• A resource for development and comparison of multimodal brain 3 T MRI harmonisation approaches

  2023cites this paper
• A comprehensive evaluation of multicentric reliability of single-subject cortical morphological networks on traveling subjects.

  2023cites this paper
• BlindHarmony: "Blind" Harmonization for MR Images via Flow model

  2023cites this paper
• Diffusion MRI harmonization via personalized template mapping

  2023cites this paper
• The organization of frontostriatal brain wiring in non-affective early psychosis compared with healthy subjects using a novel diffusion imaging fiber cluster analysis

  2023cites this paper
• Image harmonization: A review of statistical and deep learning methods for removing batch effects and evaluation metrics for effective harmonization

  2023cites this paper
• Harmonized diffusion MRI data and white matter measures from the Adolescent Brain Cognitive Development Study

  2023cites this paper
• The Role of Neuroimaging in Evolving TBI Research and Clinical Practice

  2023cites this paper
• Deep learning prediction of diffusion MRI data with microstructure-sensitive loss functions

  2023cites this paper
• White matter tract microstructure, macrostructure, and associated cortical gray matter morphology across the lifespan

  2023cites this paper
• Data harmonisation for information fusion in digital healthcare: A state-of-the-art systematic review, meta-analysis and future research directions

  2022influential citation
• Functional hybrid factor regression model for handling heterogeneity in imaging studies.

  2022cites this paper
• White Matter Microstructure Is Associated with Serum Neuroactive Steroids and Psychological Functioning

  2022cites this paper
• Personalized dMRI Harmonization on Cortical Surface

  2022cites this paper
• Predicting Dementia Severity by Merging Anatomical and Diffusion MRI with Deep 3D Convolutional Neural Networks

  2022cites this paper
• Cross-site harmonization of multi-shell diffusion MRI measures based on rotational invariant spherical harmonics (RISH)

  2022cites this paper
• Short superficial white matter and aging: A longitudinal multi-site study of 1293 subjects and 2711 sessions

  2022cites this paper
• Contrastive semi-supervised harmonization of single-shell to multi-shell diffusion MRI.

  2022cites this paper
• A transfer learning approach to few-shot segmentation of novel white matter tracts

  2022cites this paper
• Multimodal neuroimaging in pediatric type 1 diabetes: a pilot multisite feasibility study of acquisition quality, motion, and variability

  2022cites this paper
• Individualised Profiling of White Matter Organisation in Moderate-to-Severe Traumatic Brain Injury Patients Using TractLearn: A Proof-of-Concept Study

  2022cites this paper
• Aging and white matter microstructure and macrostructure: a longitudinal multi-site diffusion MRI study of 1218 participants

  2022cites this paper
• Lossy compression of multidimensional medical images using sinusoidal activation networks: an evaluation study

  2022cites this paper
• Widespread effects of dMRI data quality on diffusion measures in children

  2021cites this paper
• The variability of MR axon radii estimates in the human white matter

  2021influential citation
• Detecting microstructural deviations in individuals with deep diffusion MRI tractometry

  2021cites this paper
• Fiber tractography bundle segmentation depends on scanner effects, vendor effects, acquisition resolution, diffusion sampling scheme, diffusion sensitization, and bundle segmentation workflow

  2021cites this paper
• Tract-specific MRI measures explain learning and recall differences in multiple sclerosis

  2021cites this paper
• Volumetric white matter tract segmentation with nested self-supervised learning using sequential pretext tasks

  2021cites this paper
• Same Brain, Different Look?—The Impact of Scanner, Sequence and Preprocessing on Diffusion Imaging Outcome Parameters

  2021influential citation
• Modern Technology in Multi-Shell Diffusion MRI Reveals Diffuse White Matter Changes in Young Adults With Relapsing-Remitting Multiple Sclerosis

  2021cites this paper
• From complex to neural networks

  2021cites this paper
• Making Radiomics More Reproducible across Scanner and Imaging Protocol Variations: A Review of Harmonization Methods

  2021cites this paper
• Clinical applications of magnetic resonance imaging based functional and structural connectivity

  2021cites this paper
• Pathomechanisms Behind Cognitive Disorders Following Ruptured Anterior Communicating Aneurysms: A Diffusion Tensor Imaging Study.

  2021cites this paper
• Applied machine learning in Alzheimer's disease research: omics, imaging, and clinical data

  2021cites this paper
• Simulated diagnostic performance of low-field MRI: Harnessing open-access datasets to evaluate novel devices

  2021cites this paper
• Image acquisition and quality assurance in the Boston Adolescent Neuroimaging of Depression and Anxiety study

  2020cites this paper
• Inter-site harmonization based on dual generative adversarial networks for diffusion tensor imaging: application to neonatal white matter development

  2020influential citation
• The variability of MR axon radii estimates in the human brain

  2020cites this paper
• Generalizing deep whole-brain segmentation for post-contrast MRI with transfer learning

  2020cites this paper
• Current Challenges and Future Directions in Diffusion MRI: From Model- to Data- Driven Analysis

  2020cites this paper
• Exploring the limits of ComBat method for multi-site diffusion MRI harmonization

  2020cites this paper
• Deep learning-based unlearning of dataset bias for MRI harmonisation and confound removal

  2020cites this paper
• Uncertainty modelling in deep learning for safer neuroimage enhancement: Demonstration in diffusion MRI

  2020cites this paper
• The sensitivity of diffusion MRI to microstructural properties and experimental factors

  2020cites this paper
• Baseline Cortical Thickness Reductions in Clinical High Risk for Psychosis: Brain Regions Associated with Conversion to Psychosis Versus Non-Conversion as Assessed at One-Year Follow-Up in the Shanghai-At-Risk-for-Psychosis (SHARP) Study.

  2020cites this paper
• A deep learning-based method for improving reliability of multicenter diffusion kurtosis imaging with varied acquisition protocols.

  2020cites this paper
• Integrating large-scale neuroimaging research datasets: Harmonisation of white matter hyperintensity measurements across Whitehall and UK Biobank datasets

  2020influential citation