Do joint species distribution models reliably detect interspecific interactions from co‐occurrence data in homogenous environments?

No abstract is available for this paper.

• Publication year

  2018

• Venue

  Ecography

• Publication date

  2018-11-01

• Fields of study

  Biology, Environmental Science

• Identifiers
  DOI 10.1111/ecog.03315
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar

• No claims are published for this paper.

• No concepts are published for this paper.

• Joint species distribution modelling for spatio‐temporal occurrence and ordinal abundance data

  2018cited by this paper
• Frequency and intensity of facilitation reveal opposing patterns along a stress gradient

  2018cited by this paper
• How to make more out of community data? A conceptual framework and its implementation as models and software.

  2017cited by this paper
• Linking macroecology and community ecology: refining predictions of species distributions using biotic interaction networks

  2017cited by this paper
• boral – Bayesian Ordination and Regression Analysis of Multivariate Abundance Data in r

  2016cited by this paper
• Elements Of Mathematical Ecology

  2016cited by this paper
• Effects of functional traits on the prediction accuracy of species richness models

  2016cited by this paper
• Improving the forecast for biodiversity under climate change

  2016cited by this paper
• Benchmarking novel approaches for modelling species range dynamics

  2016cited by this paper
• Uncovering hidden spatial structure in species communities with spatially explicit joint species distribution models

  2016cited by this paper
• A theory for species co-occurrence in interaction networks

  2016cited by this paper
• Inferring biotic interactions from proxies.

  2015cited by this paper
• So Many Variables: Joint Modeling in Community Ecology.

  2015cited by this paper
• From species distributions to meta-communities.

  2015cited by this paper
• Inferring species interactions from co-occurrence data with Markov networks

  2015influential reference
• The Roles of Ecological and Evolutionary Processes in Plant Community Assembly: The Environment, Hybridization, and Introgression Influence Co-occurrence of Eucalyptus

  2015cited by this paper
• The influence of interspecific interactions on species range expansion rates

  2014cited by this paper
• Competition‐interaction landscapes for the joint response of forests to climate change

  2014cited by this paper
• R: A language and environment for statistical computing.

  2014influential reference
• Understanding co‐occurrence by modelling species simultaneously with a Joint Species Distribution Model (JSDM)

  2014cited by this paper
• Climate Change and the Past, Present, and Future of Biotic Interactions

  2013cited by this paper
• A road map for integrating eco-evolutionary processes into biodiversity models.

  2013cited by this paper
• Combining food web and species distribution models for improved community projections

  2013cited by this paper
• The geographic scaling of biotic interactions

  2013influential reference
• Integrating biodiversity distribution knowledge: toward a global map of life.

  2012cited by this paper
• Towards novel approaches to modelling biotic interactions in multispecies assemblages at large spatial extents

  2012cited by this paper
• The role of biotic interactions in shaping distributions and realised assemblages of species: implications for species distribution modelling

  2012cited by this paper
• Macroecological signals of species interactions in the Danish avifauna

  2010cited by this paper
• Species Distribution Models: Ecological Explanation and Prediction Across Space and Time

  2010cited by this paper
• The virtual ecologist approach: simulating data and observers

  2010cited by this paper
• Biotic and abiotic variables show little redundancy in explaining tree species distributions

  2010cited by this paper
• Modeling species co-occurrence by multivariate logistic regression generates new hypotheses on fungal interactions.

  2010cited by this paper
• Static species distribution models in dynamically changing systems: how good can predictions really be?

  2009cited by this paper
• Hierarchical models facilitate spatial analysis of large data sets: a case study on invasive plant species in the northeastern United States.

  2009cited by this paper
• Niches and distributional areas: Concepts, methods, and assumptions

  2009cited by this paper
• Ecological niches. Linking classical and contemporary approaches

  2008cited by this paper
• The interplay of positive and negative species interactions across an environmental gradient: insights from an individual-based simulation model

  2005cited by this paper
• Predicting species distribution: offering more than simple habitat models.

  2005cited by this paper
• COMPETITIVE INTERACTIONS BETWEEN TREE SPECIES IN NEW ZEALAND'S OLD‐GROWTH INDIGENOUS FORESTS

  2001cited by this paper
• Predictive habitat distribution models in ecology

  2000cited by this paper
• On the relationship between niche and distribution

  2000cited by this paper
• Matters of scale.

  1993cited by this paper

• Large language models unlock the ecology of species interactions

  2026cites this paper
• Estimating competition outcomes between native and invading species using trait and count data.

  2026cites this paper
• CISO: Species distribution modelling Conditioned on Incomplete Species Observations

  2026cites this paper
• Challenges in detecting ecological interactions using sedimentary ancient DNA data

  2025cites this paper
• Metaweb approaches for understanding complex ecological interactions: A review

  2025cites this paper
• CISO: Species Distribution Modeling Conditioned on Incomplete Species Observations

  2025cites this paper
• Disentangling assembly processes: environmental and biotic filtering jointly drive lagoon fish co-occurrence patterns

  2025cites this paper
• Joint species‐trait distribution modeling: The role of intraspecific trait variation in community assembly

  2025cites this paper
• Effect of Interspecific Competition Between Bactrocera dorsalis (Hendel) and Bactrocera zonata (Saunders) on the Life History Traits

  2025cites this paper
• Unraveling Fish Community Assembly Rules in Coastal China Seas Based on Hierarchical Modeling of Species Communities

  2025cites this paper
• Zero-shot deep learning for the annotation of unknown eDNA sequences using co-occurrences and phylogenetic embeddings

  2025cites this paper
• Abundance redistribution increases predator-prey interaction potentials among North American birds

  2025cites this paper
• Combining observational and experimental data to estimate environmental and species drivers of fungal metacommunity dynamics

  2025cites this paper
• Assembly processes inferred from eDNA surveys of a pond metacommunity are consistent with known species ecologies

  2025cites this paper
• Inferring Species Interactions From Co‐occurrence Networks With Environmental DNA Metabarcoding Data in a Coastal Marine Food Web

  2025cites this paper
• Integrating food webs in species distribution models can improve ecological niche estimation and predictions

  2025cites this paper
• Reviewing and benchmarking ecological modelling practices in the context of land use

  2025cites this paper
• Uncovering symmetric and asymmetric species associations from community and environmental data

  2025cites this paper
• Common processes drive metacommunity structure in freshwater fish

  2024cites this paper
• How do ecologists estimate occupancy in practice?

  2024cites this paper
• Should we exploit opportunistic databases with joint species distribution models? Artificial and real data suggest it depends on the sampling completeness

  2024cites this paper
• Climate change may make pine wilt disease more prevalent

  2024cites this paper
• Asymmetric Biotic Interactions Cannot Be Inferred Without Accounting for Priority Effects.

  2024cites this paper
• Embracing plant–plant interactions—Rethinking predictions of species range shifts

  2024influential citation
• The role of phorophyte species and interspecific interactions in co-occurrence patterns of the primeval forest relict Dicranum viride

  2024cites this paper
• Using joint species distribution modelling to predict distributions of seafloor taxa and identify vulnerable marine ecosystems in New Zealand waters

  2024cites this paper
• Future trends of marine fish biomass distributions from the North Sea to the Barents Sea

  2024cites this paper
• Environmental Response of Tree Species Distribution in Northeast China with the Joint Species Distribution Model

  2024cites this paper
• Big data, big problems? How to circumvent problems in biodiversity mapping and ensure meaningful results

  2024cites this paper
• Leveraging relationships between species abundances to improve predictions and inform conservation

  2024cites this paper
• Vegetation structure drives mosquito community composition in UK’s largest managed lowland wetland

  2024cites this paper
• Quantifying the relative importance of biotic and abiotic factors in landscape-based models of stream fish distributions

  2024cites this paper
• Inferring species interactions from co-occurrence networks with environmental DNA metabarcoding data in a coastal marine food-web

  2024cites this paper
• Rethinking ecological niches and geographic distributions in face of pervasive human influence in the Anthropocene

  2024cites this paper
• Assembly processes inferred from eDNA surveys of a pond metacommunity are consistent with known species ecologies

  2024cites this paper
• Assessing abiotic correlations of an indicator species with sympatric riparian birds in a threatened submontane river–forest system using joint species modelling

  2023cites this paper
• Predicting and quantifying coexistence outcomes between resident and invading species using trait and abundance data

  2023influential citation
• A Multifaceted Framework To Assess tradeoffs in Interpretability, Explanatory and Predictive Performances Of Alternative Joint Species Distribution Models

  2023cites this paper
• Modelling potential natural pest control ecosystem services provided by arthropods in agricultural landscapes

  2023cites this paper
• Relict Plants Are Better Able to Adapt to Climate Change: Evidence from Desert Shrub Communities

  2023cites this paper
• Isolating interactions from co-occurrences

  2023cites this paper
• Novel community data in ecology-properties and prospects.

  2023cites this paper
• Modelling the future distribution of rare bryophytes in Scotland: the importance of the inclusion of habitat loss

  2023cites this paper
• Constructing indicator species distribution models to study the potential invasion risk of invasive plants: A case of the invasion of Parthenium hysterophorus in China

  2023cites this paper
• No country for small birds: Potential positive association among medium‐sized, aggressive species in Australian bird communities

  2023cites this paper
• Schrödinger’s Range-Shifting Cat: How Skewed Temperature Dependence Impacts Persistence with Climate Change

  2023cites this paper
• Predicting future conservation areas while avoiding sympatry in two alpine amphibians severely threatened by climate change

  2023cites this paper
• Abundance and Diversity of Culicoides Species (Diptera: Ceratopogonidae) in Different Forest Landscapes of Karnataka, India: Implications for Culicoides Borne Diseases

  2023cites this paper
• Competition and the century-long decline of a once common lizard, Sceloporus consobrinus

  2023influential citation
• Plant-mediated effects of fire and fragmentation drive plant-pollinator interaction β-diversity in fire-dependent pine savannas

  2023cites this paper
• Accounting for trait variability and coordination in predictions of drought-induced range shifts in woody plants.

  2023cites this paper
• Impact of life history stages on fish species interactions and spatio-temporal distribution

  2023cites this paper
• Joint species distribution models unveil co‐occurrences between freshwater mussels and their fish hosts

  2023cites this paper
• Species associations in joint species distribution models: from missing variables to conditional predictions

  2023cites this paper
• Niche filtering, competition and species turnover in a metacommunity of freshwater molluscs

  2022cites this paper
• Schrödinger’s range-shifting cat: analytic predictions for the effect of asymmetric environmental performance on climate change responses

  2022cites this paper
• Codistribution as an indicator of whole metacommunity response to environmental change

  2022cites this paper
• Biotic and abiotic effects determining the resilience of conifer mountain forests: The case study of the endangered Spanish fir

  2022cites this paper
• Competition mediates understorey species range shifts under climate change

  2022cites this paper
• Do large‐scale associations in birds imply biotic interactions or environmental filtering?

  2022cites this paper
• Impacts of trophic interactions on the prediction of spatio-temporal distribution of mid-trophic level fishes

  2022cites this paper
• Investigating Plant–Bird Co-Occurrence Patterns in Mediterranean Wetlands: Can They Reveal Signals of Ecosystem Connectivity?

  2022cites this paper
• Climate change paves the way for a new inter‐ocean fish interchange

  2022cites this paper
• Modelling the distribution and intraguild associations of an understudied mesocarnivore across the contiguous United States

  2022cites this paper
• Predicting Schrödinger’s range-shifting cat: Analytic results

  2022cites this paper
• The Influence of the Interaction between Climate and Competition on the Distributional Limits of European Shrews

  2021influential citation
• Fungal Communities Are Important Determinants of Bacterial Community Composition in Deadwood

  2021cites this paper
• Simultaneous equations modelling of communities with interacting species networks

  2021cites this paper
• Quantifying the overall effect of biotic interactions on species communities along environmental gradients

  2021cites this paper
• A needle in the haystack? Applying species co-occurrence frameworks with fish assemblage data to identify species associations and sharpen ecological hypotheses.

  2021cites this paper
• Scale dependency of joint species distribution models challenges interpretation of biotic interactions

  2021influential citation
• Measurement and analysis of interspecific spatial associations as a facet of biodiversity

  2021cites this paper
• Improving predictions of range expansion for invasive species using joint species distribution models and surrogate co‐occurring species

  2021cites this paper
• Incorporating Biotic Information in Species Distribution Models: A Coregionalized Approach

  2021cites this paper
• Automatic detection of fish and tracking of movement for ecology

  2021cites this paper
• An Ecologically Framed Comparison of The Potential for Zoonotic Transmission of Non-Human and Human-Infecting Species of Malaria Parasite

  2021cites this paper
• Deriving indicators of biodiversity change from unstructured community‐contributed data

  2021cites this paper
• Conditional love? Co‐occurrence patterns of drought‐sensitive species in European grasslands are consistent with the stress‐gradient hypothesis

  2021cites this paper
• Broad‐scale patterns of geographic avoidance between species emerge in the absence of fine‐scale mechanisms of coexistence

  2021cites this paper
• Constructing ecological indices for urban environments using species distribution models

  2021cites this paper
• Quantifying the overall effect of biotic interactions on species distributions along environmental gradients

  2021influential citation
• Joint species distributions reveal the combined effects of host plants, abiotic factors and species competition as drivers of community structure in fruit flies

  2020cites this paper
• Index

  2020cites this paper
• Preface

  2020cites this paper
• Linking biotic homogenisation with large-scale changes of species associations

  2020cites this paper
• Improved understanding and prediction of freshwater fish communities through the use of joint species distribution models

  2020cites this paper
• A new method for faster and more accurate inference of species associations from novel community data

  2020cites this paper
• Data collected by fruit body‐ and DNA‐based survey methods yield consistent species‐to‐species association networks in wood‐inhabiting fungal communities

  2020cites this paper
• Evaluating the influence of spatially varying catchability on multispecies distribution modelling

  2020cites this paper
• Non‐native palms (Arecaceae) as generators of novel ecosystems: A global assessment

  2020cites this paper
• Model-based ordination for species with unequal niche widths

  2020cites this paper
• The ethics of isolation, the spread of pandemics, and landscape ecology

  2020cites this paper
• Modelling sexually deceptive orchid species distributions under future climates: the importance of plant–pollinator interactions

  2020cites this paper
• Accounting for environmental variation in co‐occurrence modelling reveals the importance of positive interactions in root‐associated fungal communities

  2020cites this paper
• Scale dependence of ecological assembly rules: Insights from empirical datasets and joint species distribution modelling

  2020influential citation
• Responses of lake macrophyte species and functional traits to climate and land use changes.

  2020cites this paper
• Joint Species Distribution Modelling: With Applications in R

  2020cites this paper
• Dos and don'ts when inferring assembly rules from diversity patterns

  2020cites this paper
• Reconstructing Population Histories in Relation to Ecology

  2020cites this paper
• Spatially explicit models as tools for implementing effective management strategies for invasive alien mammals

  2020cites this paper