Structural and biochemical studies of Sporosarcina pasteurii UreE: a nickel-chaperone involved in the urease activation process

No abstract is available for this paper.

• Publication year

  2014

• Venue

  Unknown venue

• Publication date

  2014-04-04

• Fields of study

  Biology, Chemistry

• Identifiers
  DOI 10.6092/UNIBO/AMSDOTTORATO/6491
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar

• No claims are published for this paper.

• No concepts are published for this paper.

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  2013influential reference
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  2013influential reference
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