LC/MS analysis of cellular RNA reveals NAD-linked RNA

Y. G. Chen,Walter E. Kowtoniuk,Isha Agarwal,Yinghua Shen,David R. Liu

Published 2009 in Nature Chemical Biology

ABSTRACT

We developed a general method to detect cellular small molecule-RNA conjugates that does not rely on the reactivity of the small molecule, revealing NAD-linked RNA in E. coli and S. venezuelae. Subsequent characterization shows NAD is a 5’ modification of RNA, cannot be installed in vitro through aberrant transcriptional initiation, is only found among smaller cellular RNAs, and is present at a surprisingly high abundance of ~3000 copies per cell.

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